KEGG   Nocardioides dokdonensis: I601_1185
Entry
I601_1185         CDS       T04431                                 
Symbol
pdhD_1
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ndk  Nocardioides dokdonensis
Pathway
ndk00010  Glycolysis / Gluconeogenesis
ndk00020  Citrate cycle (TCA cycle)
ndk00260  Glycine, serine and threonine metabolism
ndk00280  Valine, leucine and isoleucine degradation
ndk00310  Lysine degradation
ndk00380  Tryptophan metabolism
ndk00620  Pyruvate metabolism
ndk00630  Glyoxylate and dicarboxylate metabolism
ndk00640  Propanoate metabolism
ndk00670  One carbon pool by folate
ndk00785  Lipoic acid metabolism
ndk01100  Metabolic pathways
ndk01110  Biosynthesis of secondary metabolites
ndk01120  Microbial metabolism in diverse environments
ndk01200  Carbon metabolism
ndk01210  2-Oxocarboxylic acid metabolism
ndk01240  Biosynthesis of cofactors
Module
ndk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ndk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ndk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ndk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ndk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    I601_1185 (pdhD_1)
   00020 Citrate cycle (TCA cycle)
    I601_1185 (pdhD_1)
   00620 Pyruvate metabolism
    I601_1185 (pdhD_1)
   00630 Glyoxylate and dicarboxylate metabolism
    I601_1185 (pdhD_1)
   00640 Propanoate metabolism
    I601_1185 (pdhD_1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    I601_1185 (pdhD_1)
   00280 Valine, leucine and isoleucine degradation
    I601_1185 (pdhD_1)
   00310 Lysine degradation
    I601_1185 (pdhD_1)
   00380 Tryptophan metabolism
    I601_1185 (pdhD_1)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    I601_1185 (pdhD_1)
   00670 One carbon pool by folate
    I601_1185 (pdhD_1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ndk04147]
    I601_1185 (pdhD_1)
Enzymes [BR:ndk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     I601_1185 (pdhD_1)
Exosome [BR:ndk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   I601_1185 (pdhD_1)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 NAD_binding_8 GIDA HI0933_like DAO FAD_binding_3 Lys_Orn_oxgnase AlaDh_PNT_C FAD_binding_2 NAD_binding_7 Trp_halogenase 2-Hacid_dh_C 3HCDH_N TrkA_N ThiF Lycopene_cycl Amino_oxidase
Other DBs
NCBI-ProteinID: ANH37627
UniProt: A0A1A9GH55
LinkDB
Position
complement(1228814..1230202)
AA seq 462 aa
MSAAPERVRTEVLVLGGGPGGYVAALRAATLGAEVTLVERDHLGGVCLNEGCIPSKILLH
AAETVESVVHAPWARSNSPITLDHAGLQLFKTDTVGRLRGGIAGLLRARRVRVITGLGRF
TGEHTLAVEGADGGTEVEFDYAVVATGSAPVELASLPFDHDRVVHARHVLDWRHTPDRVV
VVGGGAIGVELATFLGASGAEVLLVEAQDRLLAGFDATVVRPVLDALRERGVSIRTSTVV
EDDDGTTVGLRSAAGEVERIETDHVVVAVGRRPLLPDLGPLDLRRGPGGHLLVDDRLRTS
APHVFAIGDLTQGPALAHRAMAQGKVAGHNAHGADEVFDPVCVPSVVYSAPELARAGLTP
DEAQALGHDVATTRFSLRGNGRALGLGVDGDGLLLHDAVTGLVLGFELSGPAAGEVVPSL
VVALEMGAVVQDLADMVFPHPSVSEVVGEMADLALGLGLHGR
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgagcgccgctcccgaacgcgtccggaccgaggtgctggtgctcggcggtggacccggc
gggtacgtcgccgcgctccgcgcggccaccctcggcgccgaggtgaccctggtcgagcgt
gaccatctcggcggggtctgcctcaacgagggctgcatccccagcaagatcctgctgcac
gccgccgagaccgtggagagcgtcgtccacgcgccgtgggcgcgcagcaactcgccgatc
accctcgaccacgctggtctccagctgttcaagaccgacacggtgggccggctgcgcggc
gggatcgcgggcctgctgcgggcccggcgggtccgcgtgatcaccggtctcggacgcttc
accggcgagcacaccctggccgtcgagggtgcggacggcggcaccgaggtggagttcgac
tacgcggtggtcgcgaccggttcagccccggtcgagctcgcctcccttccgttcgaccac
gaccgggtggtgcacgcgcgccacgtcctggactggcggcacaccccggaccgcgtcgtc
gtggtcgggggcggggcgatcggcgtcgagctcgccaccttcctgggcgcgtccggtgcc
gaggtgctgttggtggaagcgcaggaccggctgctcgccgggttcgacgccaccgtggtg
cgaccggtcctcgatgctctccgggaacgtggggtgtcgatccgcacctcgaccgtcgtc
gaggacgacgacggcaccaccgtaggtctgcgcagtgcggccggcgaggtggagcggatc
gagaccgaccacgtcgtggtcgccgtcgggcgtaggccgctcctgcccgacctcggcccg
ctcgacctgcgccgggggccgggtggccacctgctggtcgacgaccggctgcgcacctcg
gccccgcacgtgttcgcgatcggtgacctgacccagggccccgccctggcgcaccgggcg
atggcgcagggcaaggtcgccggccacaacgcccacggcgcggacgaggtcttcgacccg
gtctgcgtgccgagcgtcgtctactcggcccccgagctggcgcgcgcgggtctgaccccg
gacgaggcgcaggcgctgggccacgacgtggccaccacccgcttctcgttgcgtggcaat
ggtcgggccttgggcctgggcgtcgacggtgacggactgctcctgcacgacgcggtcacc
ggcctggtgctcggcttcgagctgtccggcccggcagcgggggaggtcgtgcccagcctg
gtcgtcgcgctcgagatgggcgccgtggtccaggacctggccgacatggtcttcccgcac
ccgtcggtctcggaggtggtcggggagatggccgacctggcgctcgggctcggcctgcac
ggccgctga

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