Nocardioides dokdonensis: I601_1278
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Entry
I601_1278 CDS
T04431
Symbol
gyrB_1
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ndk
Nocardioides dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndk03032
]
I601_1278 (gyrB_1)
03400 DNA repair and recombination proteins [BR:
ndk03400
]
I601_1278 (gyrB_1)
Enzymes [BR:
ndk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I601_1278 (gyrB_1)
DNA replication proteins [BR:
ndk03032
]
Prokaryotic type
DNA Topoisomerases
I601_1278 (gyrB_1)
DNA repair and recombination proteins [BR:
ndk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I601_1278 (gyrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ANH37720
UniProt:
A0A1A9GJ54
LinkDB
All DBs
Position
1330985..1333234
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AA seq
749 aa
AA seq
DB search
MVWGLLGGIMDLGSPLAARSMSWLVTRACNEEVDVSEQTPNPDDQQDSPAAPPAGAAPEG
SAAPADRRPNGVEYDASAIQVLEGLEAVRKRPGMYIGSTGERGLHHLIWEIVDNAVDESL
AGYCDRIVLTLLADGGVRVEDNGRGIPTGTAPGQEIPALTLALTVLHAGGKFGGGGYKVS
GGLHGVGVSVVNALSTHLIAEVKNRDHLWRQTFSIGVPDGELEQVRALGDDEGTGTTITY
YPSPDIFETTRHSLETITSRVREYAFLNKGLEIVVRDERSAADALMDAVEDDTVPEDVDS
AGPDALQRGAEGGSEQIFRYDRGLVDFVEHLNRTKTVANPSVISFEADTPESVENHMSLE
VAMQWNTSYAESVHTFANTINTHEGGTHEEGFRSALTSLMNNAGFDWGLMKKQEDRITGD
DIREGLTAIISLKLGEPQFEGQTKTKLGNTEAKGFVQRVVNDQLGAWLEQNPQEGRDIIR
KAQAAAHARVAARKARDLARSRKGLLGGGGLPGKLSDCQSTNPAECEVFIVEGDSAGGSA
RQGRDPRIQAILPIRGKILNVEKARIDKVLGNAEVQTIISALGTGIQEEFDGDKLRYHKV
VLMADADVDGHHINTLLLTLLFRFMRPLIERGYVYMAQPPLYRLRWNKPAEHEFVYSDAE
RDALLKEGQAAGKKLPKENPVQRYKGLGEMNAKELWETTMDPDQRLMLQVTLDDAAHADE
IFSILMGEDVEQRRSFIQRNAKDVRFLDI
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtggtctggggccttctgggcggtatcatggacctcgggtcgcctctggcggcccgttcc
atgtcgtggctcgtcacgcgagcctgcaacgaagaggtggacgtgtccgagcagaccccc
aacccggacgaccagcaggactccccagcagcacccccggcaggcgcggcacccgaagga
tccgcagcacccgccgaccgtcgacccaacggggtcgagtacgacgcctcggcgatccag
gtgctcgagggtctcgaggcggtgcgcaagcggcccggcatgtacatcgggtccacgggc
gagcgcggactgcaccacctcatctgggagatcgtggacaacgcggtcgacgagtcgctc
gccggctactgcgaccggatcgtgctgaccctgctcgccgacggcggcgtccgtgtcgag
gacaacggtcgcggcatccccaccggcaccgctcccggacaggagatccccgcgctgacg
ctggccctgaccgtgctgcacgcgggcggcaagttcggcggcggcggctacaaggtctcc
ggtggtctgcacggcgtgggcgtctccgtcgtcaacgcgctgtccacccacctcatcgcc
gaggtgaagaaccgtgaccacctgtggcgccagaccttcagcatcggggtgccggacggc
gagctcgagcaggtccgcgcgctgggtgacgacgagggcaccggcaccacgatcacgtac
tacccatcgcccgacatcttcgagaccacccggcactcgctggagacgatcacctcgcgg
gtgcgcgagtacgcgttcctcaacaagggcctcgagatcgtggtgcgtgacgagcgctcc
gccgccgacgccctgatggacgccgtcgaggacgacaccgtccccgaggacgtcgacagc
gcgggtcccgacgccctgcagcgcggtgccgagggcggcagcgagcagatcttccgctac
gaccgcggcctggtggacttcgtcgagcacctcaaccggaccaagacggtcgcgaacccc
tcggtgatctcgttcgaggccgacaccccggagtcggtcgagaaccacatgagcctcgag
gtggcgatgcagtggaacacctcgtacgccgagtcggtgcacaccttcgccaacaccatc
aacacccacgagggcggcacccacgaggagggcttccgctccgcgctcacctcgctgatg
aacaacgccgggttcgactgggggttgatgaagaagcaggaggaccggatcaccggtgac
gacatccgtgagggtctgaccgcgatcatctccctcaagctcggcgagccccagttcgag
ggccagaccaagaccaagctcggcaacaccgaggccaagggcttcgtgcagcgggtggtc
aacgaccagctcggcgcctggctggagcagaacccgcaggagggccgcgacatcatccgc
aaggcccaggccgcggcgcacgcccgggtcgcggcccgcaaggcccgcgacctggcgcgc
tcgcgcaaggggctgctgggcggcggcggtctgcccggcaagctgtcggactgccagtcc
accaaccccgccgagtgcgaggtcttcatcgtcgagggcgactcggccggcggctcggcc
cgccagggtcgtgacccgcggatccaggcgatcctgccgatccgcggaaagatcctcaac
gtcgagaaggcacgcatcgacaaggtcctcggcaacgccgaggtgcagaccatcatctcg
gccctgggcaccggcatccaggaggagttcgacggcgacaagctgcgctaccacaaggtc
gtgctgatggccgacgccgacgtcgacggccaccacatcaacacgctcctgctgacgctg
ctgttccgcttcatgcgtccgctcatcgagcgcggctacgtctacatggcccagccgccg
ctgtaccggctgcgctggaacaagccggccgagcacgagttcgtctactccgacgccgag
cgcgacgcgctgctcaaggagggccaggccgcgggcaagaagctgcccaaggagaacccg
gtccagcgctacaagggtctgggcgagatgaacgccaaggagctgtgggagaccacgatg
gaccccgaccagcgcctgatgctgcaggtcaccctcgacgacgccgcccacgccgacgag
atcttctcgatcctgatgggcgaggacgtcgagcagcgccgctccttcatccagcgcaac
gccaaggacgtccgattcctcgatatctag
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