Nocardioides dokdonensis: I601_1468
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Entry
I601_1468 CDS
T04431
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I601_1468 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndk03400
]
I601_1468 (recD)
Enzymes [BR:
ndk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I601_1468 (recD)
DNA repair and recombination proteins [BR:
ndk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I601_1468 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
Helicase_RecD
AAA_22
UvrD-helicase
SH3_13
PhoH
Mg_chelatase
NACHT
AAA_16
AAA_28
MeaB
NTPase_1
nSTAND3
AAA_29
AAA_5
SLFN-g3_helicase
SRP54
CbiA
Motif
Other DBs
NCBI-ProteinID:
ANH37904
UniProt:
A0A1A9GI37
LinkDB
All DBs
Position
1531544..1533367
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AA seq
607 aa
AA seq
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MTQPDPLPAHDHRRARSASGLLARFNDTGLVETADVHVARRVAALAGESDDQVLLAVALA
VRGVRSGSVCVDLATVPALLEHPDWPEPGAWVAAVAASPLVDQGVLHVEDGTVYLDRYHR
LETQVCDDLVTRVAAPAPQVDHASLEAARARIRGARLSDQQERAAVGAVGRWTTVLTGGP
GTGKTTTVARLLVLLADQAAARGERFSVALTAPTGKAATRLQEAVLAELAGLDPADRERV
GRPETMTLHRLLGWRPDNATRFRHDRGNRLKHDLVVVDESSMVELTMMGRLLEAMRPESR
LVLVGDPRQLTSVGAGAVLADVVRGFADHFGEDSAASPVASLSENFRSTEDIKQLAEALR
LGDADEVLATLRRPSDEVELVELPPEPGPGEATTAVPAVAAALRERSLDLALRVRRHAEA
GEHEPAVAALDTHRLLCAHRDGPFGVRFWNRQVERWLAEELGEPVLGEWYVGRPLLVTTN
DYTLEVYNGETGAVVRQPDGRLRAWISGSEQLRDFSPARLEAVETMHAMTVHKSQGSQAA
HVTVLLPEADSRLLTRELFYTAITRAQQHVRVVASEAAVRAAVGREAQRASGLRERLARS
LSAATAG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagcccgacccgctgcccgcccacgaccaccgccgcgcgcgctccgcctccggg
ctgctggcgcgcttcaacgacaccggcctggtcgagaccgccgacgtgcacgtggcccgc
cgggttgcggcgctggccggtgagagcgacgaccaggtgctgctcgccgtggcgctcgcg
gtgcgcggggtgcgctccgggtcggtctgcgtcgacctcgccaccgtcccggccctgctc
gagcaccccgactggcccgagccgggggcctgggtcgcggcggtcgccgcctccccgctg
gtcgaccagggcgtgctgcacgtcgaggacggcaccgtctacctcgaccgctaccaccgc
ctcgagacgcaggtctgcgacgacctggtcacccgggtcgcggcgccggcgccgcaggtc
gaccacgcctccctcgaggcggcccgcgcccggatccgcggcgcgcgcctcagcgaccag
caggagcgggccgctgtcggtgccgtcggacgctggaccaccgtgctcaccggtgggccc
ggcaccggcaagacgacgacggtggcccggttgctggtgctcctcgccgaccaggccgcg
gcccgcggcgagcggttctcggtggccctgaccgcgcccaccggcaaggccgcgacccgg
ctccaggaggccgtgctcgccgagctggccggcctcgacccggccgaccgcgagcgggtc
gggcgacccgagacgatgaccctgcaccggctgctgggctggcggcccgacaacgccacc
cgcttccgccacgaccgcggcaaccggctcaagcacgacctcgtcgtcgtcgacgagtcc
tcgatggtcgagctgacgatgatggggcgcctgctcgaggcgatgcgtccggagtcccgg
ctggtcctggtcggggacccccgccagctgacctcggtgggtgcgggtgcggtgctcgcc
gacgtcgtgcgcggcttcgccgaccacttcggcgaggactccgcggcctccccggtggcc
tcgctgagcgagaacttccgttccaccgaggacatcaagcagctcgccgaggcgctgcgc
ctcggggacgccgacgaggtgctggcgacgctgcgacgccccagcgacgaggtcgagctg
gtcgagctgccccccgagccagggcccggcgaggccacgacggcggtgcccgcggtcgcc
gcggcgctgcgcgagcgctctctcgacctcgccctgcgggtccggcggcacgccgaggcc
ggcgagcacgagccggccgtggccgccctggacacccaccggctgctgtgcgcgcaccgc
gatgggccgttcggcgtacggttctggaaccggcaggtcgagcggtggctggccgaggag
ctcggcgagcccgtgctcggcgagtggtacgtcggccgcccgttgctggtgaccaccaac
gactacacgctcgaggtctacaacggcgagaccggcgcggtcgtgcgccagcccgacggc
cgcttgcgcgcctggatctccggctccgagcagctgcgcgacttctccccggcccgtctc
gaggccgtcgagaccatgcacgccatgacggtgcacaagagccagggcagccaggccgcg
cacgtgaccgtgctgctgcccgaggccgactcgcggctgctgacccgcgagctcttctac
accgcgatcacccgcgcccagcagcacgtgcgggtcgtggcctccgaggccgcggtgcgg
gccgccgtggggcgcgaggcgcagcgggcctcggggctgcgcgagcggctggcccgcagc
ctgtccgcggccacggcggggtga
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