Nocardioides dokdonensis: I601_1485
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Entry
I601_1485 CDS
T04431
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ndk
Nocardioides dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndk03016
]
I601_1485
Enzymes [BR:
ndk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
I601_1485
Transfer RNA biogenesis [BR:
ndk03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
I601_1485
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HGD-D
Motif
Other DBs
NCBI-ProteinID:
ANH37921
UniProt:
A0A1A9GKA6
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All DBs
Position
1552747..1553313
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AA seq
188 aa
AA seq
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MRLFAALIPSPEAVEHLDGFLEVRRAAAPFRWSAAEHLHVTLAFFGDVEEWRLDELLERL
QGAAARRTPVRARVAGGGAFPDPSAARVLWAGLEVEDRGGLDLLAIGCRTAGAVSGARVD
GQRFRPHLTVARLGRAAPVDDWVRLLDGYRGPAWTGDSIALVESHLGEGPQHRPRHETLA
RVGLGPGA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgttcgccgcgctgatcccctcgcccgaggccgtcgagcacctcgacgggttc
ctcgaggtgcgccgagccgcggcgcccttccggtggagcgcggccgagcacctgcacgtc
acgctggccttcttcggcgacgtcgaggagtggcgtctcgacgagctgctcgagcggctg
cagggcgccgccgcgcggcgtacgccggtccgggcgcgggtggccggcgggggcgccttc
ccggacccctccgcggcccgggtgctgtgggccgggctggaggtcgaggaccgcgggggg
ctggacctgctggcgatcggctgccgcacggccggggcggtgagcggggcacgggtcgac
gggcagcggttccgcccgcacctgacggtggcccgcctgggccgggccgcccccgttgac
gactgggtgcggctgctggacggctaccgggggccggcgtggacgggcgacagcatcgcg
ctggtcgagtcgcacctgggggaggggccgcaacaccggccccgccacgagacgctcgca
cgcgtcgggctcggtcccggcgcgtga
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