Nocardioides dokdonensis: I601_2207
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Entry
I601_2207 CDS
T04431
Symbol
ykoV
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I601_2207 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndk03400
]
I601_2207 (ykoV)
DNA repair and recombination proteins [BR:
ndk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I601_2207 (ykoV)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
CIS_TMP
Motif
Other DBs
NCBI-ProteinID:
ANH38632
UniProt:
A0A1A9GLU1
LinkDB
All DBs
Position
complement(2297689..2298645)
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AA seq
318 aa
AA seq
DB search
MRAIWKGAVSFGLVNVPVKLYSATESHDVSFRQVHAEDGGRIRYQRVCAIDGEEVPYADI
AKGYETEDGEMVILTDDDMAQLPSTSSREIAVEKFVPSDQIDPMLFEKSYYLEPEKSGAK
PYALLRQALLDADRMAVVTVALRQRTTIAVLRVRDDVIVLQTMMWPDEIRTPDFSIEPGE
VKDTEVKMATMLVETLAGDFDPSEFEDDYAAAVETMVKTKIEGGEMKRTPTSTKSSGEVV
DLLAALQRSVDAAKSGRRGNEESEESKDESSGTESKKTSAAKATKKAPAKKSAAKKAAAK
KSTAKKSTAKKTAAKKAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgatctggaagggcgcggtgtccttcgggctggtcaacgtgccggtcaagctc
tactcggcgaccgagtcgcacgacgtctccttccgccaggtccacgccgaggacggcggt
cggatccgctaccagcgggtctgcgcgatcgacggcgaggaggtgccctacgccgacatc
gccaagggctacgagaccgaggacggcgagatggtcatcctcaccgacgacgacatggcc
cagctgccctcgacgtcctcgcgagagatcgccgtcgagaagttcgtgccctcggaccag
atcgacccgatgctcttcgagaagagctactacctcgagcccgagaagtccggcgccaag
ccctacgcgctgctgcgccaggcgctgctcgacgccgaccggatggccgtggtcaccgtc
gcgctgcgccagcgcaccacgatcgcggtgctgcgggtgcgcgacgacgtcatcgtgctg
cagacgatgatgtggcccgacgagatccgcacccccgacttcagcatcgagccgggcgag
gtgaaggacaccgaggtgaagatggccacgatgctcgtcgagaccctggccggcgacttc
gacccctccgagttcgaggacgactacgccgccgccgtggagacgatggtcaagacgaag
atcgaggggggcgagatgaagcgcacccccacctccaccaagtcctccggcgaggtggtc
gacctgctcgccgcgctgcagcgctccgtcgacgccgccaagtcgggtcggcgcgggaac
gaggagtccgaggagtccaaggacgagtcgtccggcacggagtcgaagaagacctcggct
gcgaaggccaccaagaaggcgcccgcgaagaagtctgccgccaagaaggccgcggccaag
aagtcgactgccaagaagagcaccgcgaagaagacggcggccaagaaggccagctga
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