Nocardioides dokdonensis: I601_2612
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Entry
I601_2612 CDS
T04431
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ndk
Nocardioides dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndk03016
]
I601_2612 (truB)
Enzymes [BR:
ndk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
I601_2612 (truB)
Transfer RNA biogenesis [BR:
ndk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I601_2612 (truB)
Prokaryotic type
I601_2612 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ANH39028
UniProt:
A0A1A9GL67
LinkDB
All DBs
Position
2725754..2726674
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AA seq
306 aa
AA seq
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MRPSAPVPPGLVVVDKPAGITSHDVVARVRRLAGTRKVGHAGTLDPMATGVLVLGVDRAT
RLLGHLMLTEKSYDATVRLGVSTGTDDAEGETTQALGAGSVTEAAAREVLASFVGDIEQV
PTAVSAIKVDGKRAYQRVRDGEEVALKARPVTIHELVVHEVRPGQVEGPGGESLAVLDVD
LSLRCSSGTYVRAVARDAGAALGVGGHLTALRRTAVGPYDLGLARTLDELADGFAVLPLA
EAARAAFPAQDLDEQQAGDVRVGRALDLDLGALTGLFDPDGEFLALYEPREGRARAVAVF
VQGAAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgaggccctcggccccggtgccgcccgggctcgtcgtcgtcgacaagcccgcggggatc
acctcccacgacgtcgtcgcgcgggtccgccggctcgccggcacccgcaaggtcggccac
gccggcacgctggacccgatggccaccggcgtgctggtgctgggcgtggaccgcgcgacc
cggctcctcggccacctcatgctgaccgagaagtcgtacgacgccaccgtgcggctcggg
gtcagcacggggaccgacgacgctgagggtgagaccacccaggccctcggggcggggtcg
gtgaccgaggcggcggcgcgcgaggtgctggcctcgttcgtcggtgacatcgagcaggtg
ccgaccgcggtctcggcgatcaaggtggacggcaagcgtgcctaccagcgggtccgcgac
ggcgaggaggtcgcgctgaaggcacggcccgtgaccatccacgagctggtggtgcacgag
gtgcggccggggcaggtcgaggggccgggcggcgagagcctcgcggtcctcgacgtcgac
ctcagcctgcgctgctcctcgggcacctacgtgcgggccgtggcgcgcgacgccggtgcg
gccctgggtgtcggcgggcacctcaccgcgctgcgccgcaccgcggtcggtccctacgac
ctcgggctcgctcgcacgctggacgagctggccgacggcttcgccgtcctgccgctggcc
gaggcggcgcgggccgccttcccggcccaggacctcgacgagcagcaggccggcgacgtg
cgggtcggtcgggcgctcgatctcgacctgggggcgctgaccggcctcttcgaccccgac
ggggagttcctcgcgctctacgagccccgtgagggccgtgcccgagccgtcgccgtcttc
gtgcagggagcggcgggttaa
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