Nocardioides dokdonensis: I601_2704
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Entry
I601_2704 CDS
T04431
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I601_2704 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndk03400
]
I601_2704 (nfo)
Enzymes [BR:
ndk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
I601_2704 (nfo)
DNA repair and recombination proteins [BR:
ndk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
I601_2704 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ANH39120
UniProt:
A0A1A9GN81
LinkDB
All DBs
Position
complement(2816992..2817915)
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AA seq
307 aa
AA seq
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MNPSDLALRSPIGTHVLVGKGLVAGALADAERLGCETLQVFVGNPRGWALSPGRPAEDEA
FRAATAERGVRTFIHSPYLVNLGSPTPKTYENSVAVLAHNLRRAAEIGAEGVVVHTGSYV
DPSGDPQGAADRHAAALTQVREGLLPLLEALGEDGPWLLLEPTAGQGRSLCAGVEDLSAY
LEVLEHHPRAGICLDTCHVFAAGAPLDEPGGATATLDRVVEIGGPGRLRLVHANDSKDVR
GAFKDRHERIGEGHIGTGAFTELFAHPATAGVPFVLETPGSRDDDNPDIALLKQLRADAH
AAAVGAP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccgagcgacctcgccctgcgcagccccatcggcacccacgtcctggtgggcaag
ggcctggtggccggcgcgctggccgacgccgagcggctggggtgcgagacgctgcaggtc
ttcgtgggcaacccgcgcggctgggcgctgagccccggcaggcccgccgaggacgaggcg
ttccgcgcggcgaccgccgagcgcggcgtccgcaccttcatccactccccctacctggtc
aacctcggctcgcccaccccgaagacctacgagaacagcgtcgcggtgctcgcgcacaac
ctgcgccgcgccgccgagatcggtgcggagggtgtcgtcgtgcacaccggttcgtacgtc
gacccctcgggcgacccccagggcgcggccgaccggcacgcggccgcgctgacccaggtc
cgcgaggggctcctgccgctgctggaggccctgggcgaggacgggccgtggctgctgctc
gagccgaccgcgggccagggccggtcgctgtgcgccggtgtcgaggacctgtccgcctac
ctcgaggtgctggagcaccacccgcgcgcgggcatctgcctcgacacctgccacgtgttc
gccgccggcgcgccgctcgacgagcccggaggcgccaccgcgaccctcgaccgggtcgtg
gagatcggcggcccgggccggttgcggctggtgcacgccaacgactccaaggacgtgcgc
ggggcgttcaaggaccgccacgagcggatcggcgagggccacatcggcaccggtgccttc
accgagctcttcgcccacccggccaccgccggggtgccgttcgtgctggagacacccggg
tcgcgcgacgacgacaaccccgacatcgcgctgctcaagcagctgcgcgccgacgcccac
gcggcagcggtgggcgccccgtga
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