Nocardioides dokdonensis: I601_2728
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Entry
I601_2728 CDS
T04431
Symbol
pbpB
Name
(GenBank) Penicillin-binding protein PbpB
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00550
Peptidoglycan biosynthesis
ndk01100
Metabolic pathways
ndk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I601_2728 (pbpB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I601_2728 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ndk01011
]
I601_2728 (pbpB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ndk03036
]
I601_2728 (pbpB)
Enzymes [BR:
ndk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I601_2728 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ndk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
I601_2728 (pbpB)
Chromosome and associated proteins [BR:
ndk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
I601_2728 (pbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ANH39144
UniProt:
A0A1A9GLJ9
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All DBs
Position
2842474..2844285
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AA seq
603 aa
AA seq
DB search
MPTTQPSPSRASTIRRGHPHVRLRVGFVLIAMVLSLFAARLVQLQGIDPKAYAEMAAAEG
LEEVVLPAERGAILDRFGEPLAESADGLMVVADPALVNTDEEGREVDRAPEVAKLLSSKL
DVDYFTLLKRLRTESRFQYVARGVPAAQATKAVARARELGYQGLSTHRDPVRQYPADDVA
ANLVGFLGTPLADGTPQPLAGFERSFDGLLSGTDGSATFASAAGNKVPLGESTVVEARDG
QDLTTTIDRELQWYAQRVLRQTVQQARGDSGVAVVLDSRTGEVLALADHPTFDANAPLES
DEADLGSRAVSDVYEPGSVSKVLTLSALIDAGKVTPRTRLTVPGSLARQDRTIGDWFPHD
TIRLTLAGVLAKSSNIGTVLASDKFDDGQMRRYLAAFGLGSATGAGVRGESAGILPDPSL
WTSQTQDRIAFGQSVSVNALQMTAAVNAIANDGVRIDPSLVLGSATTDSGEQIGTDQATT
SQVISSDAARKTALMMERVVDPEAGVAPGAQVPGYRVAGKTGTAQRANSECGCYDGTFTV
SFAGFAPADDPRFTVYVVVQNPRNGGGGGSVAGPAFAKITGYALRRYAVPPTGTPASDLP
VEW
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaccacgcagccgtcgccgagcagggccagcaccatccgccgcgggcacccgcac
gtccggctgcgggtcgggttcgtgctgatcgcgatggtgctctcgctcttcgccgcgcgc
ctggtccagctgcagggcatcgaccccaaggcctacgccgagatggcggccgccgagggg
ctggaggaggtcgtgctgcccgctgagcggggtgcgatcctcgaccgcttcggtgagccg
ctggccgagtcggcggacgggttgatggtcgtggccgacccggcgctggtgaacaccgac
gaggagggccgcgaggtcgaccgggcccccgaggtggccaagctgctctcgtccaagctc
gacgtcgactacttcaccctgctgaagcggctgcgcaccgagagccggttccagtacgtc
gcccggggcgtgcccgcggcgcaggccaccaaggcggtggcccgggcccgcgagctgggc
taccagggcctgtccacccatcgcgacccggtgcgccagtaccccgccgacgacgtggcc
gccaacctggtcggattcctgggcaccccgctggccgacggcaccccgcagccgctggcc
gggttcgagcgctccttcgacgggctgctctccggcaccgacggctcggcgaccttcgcc
tcggccgcgggcaacaaggtcccgctgggggagtccaccgtcgtggaggcccgtgacggt
caggacctcacgaccaccatcgaccgcgagctgcagtggtacgcccagcgggtgctgcgc
cagacggtgcagcaggcccgcggcgactccggcgtcgcggtcgtgctggactcgcgcacc
ggtgaggtgctggcgctggccgaccacccgacgttcgacgcgaacgcgccgctggagtcc
gacgaggccgacctcggctcgcgcgcggtgagcgacgtctacgagccgggctcggtctcc
aaggtgctgaccctctccgccctcatcgacgccgggaaggtcactccgcgcacccggctg
acggtcccgggctcgctggcccgccaggaccggaccatcggcgactggttcccccacgac
acgatccggctgaccctggccggggtgctggccaagtcctccaacatcggcacggtgctc
gcctccgacaagttcgacgacggccagatgcgccgctacctggcggccttcgggctcggc
tcggccaccggcgccggcgtccgcggcgagtccgccggcatcctgccggacccctcgctg
tggaccagccagacccaggaccgcatcgccttcggccagtcggtctcggtcaacgcgctg
cagatgacggccgcggtcaacgcgatcgccaacgacggcgtccggatcgacccgagcctg
gtgctcggcagtgcgaccaccgactccggcgagcagatcggcaccgaccaggccaccacc
agccaggtcatcagctccgacgccgcgcgcaagacggcgctgatgatggagcgggtcgtc
gaccccgaggccggcgtcgccccgggcgcgcaggtgcccggctaccgcgtcgccggcaag
accggcaccgcgcagcgcgccaactccgagtgcggctgctacgacggcaccttcacggtc
tccttcgccggcttcgcccccgccgacgacccgcgcttcaccgtctacgtcgtggtccag
aacccccgcaacggtggcggcggtgggtcggtcgccggccccgcgttcgccaagatcacc
gggtacgcgctgcgtcgctacgcggtgccccccaccggcacccccgcctcggacctccct
gtcgagtggtga
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