Nocardioides dokdonensis: I601_2882
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Entry
I601_2882 CDS
T04431
Symbol
pdhD_2
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00010
Glycolysis / Gluconeogenesis
ndk00020
Citrate cycle (TCA cycle)
ndk00260
Glycine, serine and threonine metabolism
ndk00280
Valine, leucine and isoleucine degradation
ndk00310
Lysine degradation
ndk00380
Tryptophan metabolism
ndk00620
Pyruvate metabolism
ndk00630
Glyoxylate and dicarboxylate metabolism
ndk00640
Propanoate metabolism
ndk00670
One carbon pool by folate
ndk00785
Lipoic acid metabolism
ndk01100
Metabolic pathways
ndk01110
Biosynthesis of secondary metabolites
ndk01120
Microbial metabolism in diverse environments
ndk01200
Carbon metabolism
ndk01210
2-Oxocarboxylic acid metabolism
ndk01240
Biosynthesis of cofactors
Module
ndk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ndk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ndk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ndk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
I601_2882 (pdhD_2)
00020 Citrate cycle (TCA cycle)
I601_2882 (pdhD_2)
00620 Pyruvate metabolism
I601_2882 (pdhD_2)
00630 Glyoxylate and dicarboxylate metabolism
I601_2882 (pdhD_2)
00640 Propanoate metabolism
I601_2882 (pdhD_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I601_2882 (pdhD_2)
00280 Valine, leucine and isoleucine degradation
I601_2882 (pdhD_2)
00310 Lysine degradation
I601_2882 (pdhD_2)
00380 Tryptophan metabolism
I601_2882 (pdhD_2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
I601_2882 (pdhD_2)
00670 One carbon pool by folate
I601_2882 (pdhD_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ndk04147
]
I601_2882 (pdhD_2)
Enzymes [BR:
ndk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
I601_2882 (pdhD_2)
Exosome [BR:
ndk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
I601_2882 (pdhD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
DAO
HI0933_like
GIDA
FAD_binding_2
AlaDh_PNT_C
FAD_oxidored
3HCDH_N
NAD_binding_8
2-Hacid_dh_C
Lycopene_cycl
Amino_oxidase
Thi4
Motif
Other DBs
NCBI-ProteinID:
ANH39298
UniProt:
A0A1A9GLZ4
LinkDB
All DBs
Position
complement(3021076..3022455)
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AA seq
459 aa
AA seq
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MPDTDFDVLILGAGSGGYACALRAAQLGLSVALVEKGDLGGTCLHMGCIPTKALLHAAEI
ADAARDSEQFGVRATLEGIDMAGVNSYKDGVVSRLFKGLTGLVKGRGVTVVAGEGRLTGP
REVTVDGTAYTGRHVVLATGSYARSLPGLEVDGTHVLTSDHALRLERVPASVVVLGGGVI
GCEFASVWRSFGAEVTIVEALPRLVAAEDEASSKVLERAFKKRGIKARTGTPFQSVKTTD
DGVAVTVEGGDVIEAELLLVAVGRGPSTDGLGYDEQGVEMERGFVRTDDRCRTNLEGVYA
VGDIVPGLQLAHRGFQQGIFVAEHIAGLDPAPIDEAGIPRVTYSHPEVASVGLDEATARS
TYGDDAIETLTYDLGGNGKSQILKTQGFVKLVRRTDGPVVGVHLVGDRVGELIGEAQLIY
GWEAHAEDVAPLVHAHPTQNEALGEAHLALAGKALHAHS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgacaccgacttcgacgtactcatcctcggcgctggctcggggggttacgcgtgc
gcgctgcgcgctgcccagctcggcctgagcgtggcgctggtggagaagggcgacctgggc
ggcacctgcctgcacatgggctgcatcccgaccaaggccctgctgcacgcggccgagatc
gccgacgccgcccgcgactccgagcagttcggcgtgcgcgccacgctcgagggcatcgac
atggccggggtgaactcctacaaggacggcgtcgtctcgcgcctcttcaagggcctgacc
ggcctcgtcaaggggcgcggcgtcaccgtcgtcgccggcgagggccggctcaccggtccc
cgcgaggtcaccgtcgacggcacggcctacaccgggcgccacgtcgtgctggccaccggc
tcgtacgcccgctcgctgcccggcctcgaggtcgacggcacccacgtgctcacctccgac
cacgcgctgcgcctcgagagggtgccggcctccgtggtcgtgctcggtggcggcgtcatc
gggtgcgagttcgccagcgtgtggcgcagcttcggcgccgaggtgaccatcgtcgaggcg
ctgccccggctggtggccgccgaggacgaggcgtcctccaaggtcctcgagcgggcgttc
aagaagcgcggcatcaaggcccgcaccggcaccccgttccagagcgtgaagaccaccgac
gacggggtcgccgtcacggtcgagggaggcgacgtcatcgaggccgagctgctcctcgtg
gcggtggggcgcggtcccagcaccgacggcctcggctacgacgagcagggcgtcgagatg
gagcgcggcttcgtgcgcaccgacgaccgctgccgcaccaacctcgagggcgtctacgcc
gtcggcgacatcgtgcccgggctccaactcgcgcaccgcggcttccagcagggcatcttc
gtggccgagcacatcgccgggctcgacccggcccccatcgacgaggccggcatcccgcgg
gtgacctactcccacccggaggtcgcctccgtcggactcgacgaggccaccgcgcgctcg
acgtacggcgacgacgcgatcgagacgctgacctacgacctcggcggcaacggcaagagc
cagatcctcaagacccagggcttcgtcaagctcgtacgccgcaccgacggtccggtcgtg
ggcgtgcacctggtcggcgaccgggtcggcgagctcatcggcgaggcccagctgatctac
ggctgggaggcgcacgccgaggatgtcgcgcccctggtccacgcccaccccacccagaac
gaggctctcggcgaggcgcacctcgccctggccggcaaggcgctgcatgcacattcgtga
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