KEGG   Nocardioides dokdonensis: I601_2882
Entry
I601_2882         CDS       T04431                                 
Symbol
pdhD_2
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ndk  Nocardioides dokdonensis
Pathway
ndk00010  Glycolysis / Gluconeogenesis
ndk00020  Citrate cycle (TCA cycle)
ndk00260  Glycine, serine and threonine metabolism
ndk00280  Valine, leucine and isoleucine degradation
ndk00310  Lysine degradation
ndk00380  Tryptophan metabolism
ndk00620  Pyruvate metabolism
ndk00630  Glyoxylate and dicarboxylate metabolism
ndk00640  Propanoate metabolism
ndk00670  One carbon pool by folate
ndk00785  Lipoic acid metabolism
ndk01100  Metabolic pathways
ndk01110  Biosynthesis of secondary metabolites
ndk01120  Microbial metabolism in diverse environments
ndk01200  Carbon metabolism
ndk01210  2-Oxocarboxylic acid metabolism
ndk01240  Biosynthesis of cofactors
Module
ndk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ndk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ndk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ndk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ndk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    I601_2882 (pdhD_2)
   00020 Citrate cycle (TCA cycle)
    I601_2882 (pdhD_2)
   00620 Pyruvate metabolism
    I601_2882 (pdhD_2)
   00630 Glyoxylate and dicarboxylate metabolism
    I601_2882 (pdhD_2)
   00640 Propanoate metabolism
    I601_2882 (pdhD_2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    I601_2882 (pdhD_2)
   00280 Valine, leucine and isoleucine degradation
    I601_2882 (pdhD_2)
   00310 Lysine degradation
    I601_2882 (pdhD_2)
   00380 Tryptophan metabolism
    I601_2882 (pdhD_2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    I601_2882 (pdhD_2)
   00670 One carbon pool by folate
    I601_2882 (pdhD_2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ndk04147]
    I601_2882 (pdhD_2)
Enzymes [BR:ndk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     I601_2882 (pdhD_2)
Exosome [BR:ndk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   I601_2882 (pdhD_2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO HI0933_like GIDA FAD_binding_2 AlaDh_PNT_C FAD_oxidored 3HCDH_N NAD_binding_8 2-Hacid_dh_C Lycopene_cycl Amino_oxidase Thi4
Other DBs
NCBI-ProteinID: ANH39298
UniProt: A0A1A9GLZ4
LinkDB
Position
complement(3021076..3022455)
AA seq 459 aa
MPDTDFDVLILGAGSGGYACALRAAQLGLSVALVEKGDLGGTCLHMGCIPTKALLHAAEI
ADAARDSEQFGVRATLEGIDMAGVNSYKDGVVSRLFKGLTGLVKGRGVTVVAGEGRLTGP
REVTVDGTAYTGRHVVLATGSYARSLPGLEVDGTHVLTSDHALRLERVPASVVVLGGGVI
GCEFASVWRSFGAEVTIVEALPRLVAAEDEASSKVLERAFKKRGIKARTGTPFQSVKTTD
DGVAVTVEGGDVIEAELLLVAVGRGPSTDGLGYDEQGVEMERGFVRTDDRCRTNLEGVYA
VGDIVPGLQLAHRGFQQGIFVAEHIAGLDPAPIDEAGIPRVTYSHPEVASVGLDEATARS
TYGDDAIETLTYDLGGNGKSQILKTQGFVKLVRRTDGPVVGVHLVGDRVGELIGEAQLIY
GWEAHAEDVAPLVHAHPTQNEALGEAHLALAGKALHAHS
NT seq 1380 nt   +upstreamnt  +downstreamnt
gtgcctgacaccgacttcgacgtactcatcctcggcgctggctcggggggttacgcgtgc
gcgctgcgcgctgcccagctcggcctgagcgtggcgctggtggagaagggcgacctgggc
ggcacctgcctgcacatgggctgcatcccgaccaaggccctgctgcacgcggccgagatc
gccgacgccgcccgcgactccgagcagttcggcgtgcgcgccacgctcgagggcatcgac
atggccggggtgaactcctacaaggacggcgtcgtctcgcgcctcttcaagggcctgacc
ggcctcgtcaaggggcgcggcgtcaccgtcgtcgccggcgagggccggctcaccggtccc
cgcgaggtcaccgtcgacggcacggcctacaccgggcgccacgtcgtgctggccaccggc
tcgtacgcccgctcgctgcccggcctcgaggtcgacggcacccacgtgctcacctccgac
cacgcgctgcgcctcgagagggtgccggcctccgtggtcgtgctcggtggcggcgtcatc
gggtgcgagttcgccagcgtgtggcgcagcttcggcgccgaggtgaccatcgtcgaggcg
ctgccccggctggtggccgccgaggacgaggcgtcctccaaggtcctcgagcgggcgttc
aagaagcgcggcatcaaggcccgcaccggcaccccgttccagagcgtgaagaccaccgac
gacggggtcgccgtcacggtcgagggaggcgacgtcatcgaggccgagctgctcctcgtg
gcggtggggcgcggtcccagcaccgacggcctcggctacgacgagcagggcgtcgagatg
gagcgcggcttcgtgcgcaccgacgaccgctgccgcaccaacctcgagggcgtctacgcc
gtcggcgacatcgtgcccgggctccaactcgcgcaccgcggcttccagcagggcatcttc
gtggccgagcacatcgccgggctcgacccggcccccatcgacgaggccggcatcccgcgg
gtgacctactcccacccggaggtcgcctccgtcggactcgacgaggccaccgcgcgctcg
acgtacggcgacgacgcgatcgagacgctgacctacgacctcggcggcaacggcaagagc
cagatcctcaagacccagggcttcgtcaagctcgtacgccgcaccgacggtccggtcgtg
ggcgtgcacctggtcggcgaccgggtcggcgagctcatcggcgaggcccagctgatctac
ggctgggaggcgcacgccgaggatgtcgcgcccctggtccacgcccaccccacccagaac
gaggctctcggcgaggcgcacctcgccctggccggcaaggcgctgcatgcacattcgtga

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