Nocardioides dokdonensis: I601_2970
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Entry
I601_2970 CDS
T04431
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I601_2970 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndk03400
]
I601_2970 (ruvB)
Enzymes [BR:
ndk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I601_2970 (ruvB)
DNA repair and recombination proteins [BR:
ndk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I601_2970 (ruvB)
RecFOR pathway proteins
I601_2970 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_5
AAA_16
Mg_chelatase
nSTAND3
RNA_helicase
Sigma54_activat
AAA_14
MCM
AAA_3
NTPase_1
AAA_25
Sigma54_activ_2
Zeta_toxin
IstB_IS21
NACHT
ABC_tran
TsaE
AAA_18
NB-ARC
DUF815
NPHP3_N
Rad17
AAA_28
AAA_17
Parvo_NS1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ANH39381
UniProt:
A0A1A9GPH6
LinkDB
All DBs
Position
3110216..3111313
Genome browser
AA seq
365 aa
AA seq
DB search
MHDDQYSDRDPLAAAEEHHLRSLTVAEADGDERAVEAALRPRSLDEVVGQQRVRDQLGLV
LEAARRRERCPDHVLLSGPPGLGKTTLAMIIAHEMSVPLRLTSGPAITHAGDLAAILSGL
NEGDVLFIDEIHRMSRPAEEMLYMAMEDFRVDVVIGKGPGATAIPLEIPPFTLVGATTRA
GLLPGPLRDRFGFTAQLEFYDPRDLDTIVHRSADLLGVELTSEGSAQIAFRSRGTPRIAN
RLLRRVRDYAQVRAGGVVTLAVAEAALELYEVDDLGLDRLDRGVIDVLCRRFGGGPVGVS
TLAVAVGEERETVEEVAEPFLVRIGFLARTPRGRVATPAAWAHLGLTPPPGAVGDERALF
ETDPG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgaccagtactccgaccgggaccccctcgctgccgccgaggagcaccacctg
cgctccctgaccgtggccgaggccgacggcgacgagcgcgccgtcgaggccgccctgcgc
ccgcgcagcctcgacgaggtggtgggtcagcagcgggtgcgcgaccagctcggcctcgtc
ctcgaggcggcccgccggcgcgagcgctgccccgaccacgtgctgctctccggcccgccc
ggcctgggcaagacgacgctggcgatgatcatcgcccacgagatgagcgtgcccctgcgc
ttgaccagcgggcccgccatcacccacgcgggggacctggccgccatcctgtccgggctc
aacgagggcgacgtgctgttcatcgacgagatccaccggatgtcgcgtccggccgaggag
atgctctacatggcgatggaggacttccgggtcgacgtcgtcatcggcaagggccccggg
gccaccgccatcccgctcgagatcccgcccttcacactggtcggcgcgaccacccgggcc
ggcctgctgccggggccgctgcgtgaccggttcggcttcaccgcccagctggagttctac
gacccccgggacctcgacacgatcgtgcaccgttcggcggacctgctcggggtcgagctg
accagcgagggctcggcgcagatcgccttccgctcgcgcggcacgccgcggatcgcgaac
cggctgctgcgccgcgtgcgggactacgcccaggtgcgcgccggcggggtggtcaccctc
gcggtggccgaggccgccctggagctctacgaggtcgacgacctgggtctggaccgtctc
gaccgtggcgtcatcgacgtgctgtgccgccgcttcggtggtggcccggtgggcgtgtcc
acgctcgcggtcgccgtgggggaggagcgggagaccgtcgaggaggtcgccgagccgttc
ctggtgcgcatcggattcctggcccgtacgccgcgtggtcgggtcgcgacgccggcggcc
tgggcgcacctcggcctcacgccgccgccgggagccgtgggcgacgagcgggccctcttc
gagaccgacccgggctga
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