Nocardioides dokdonensis: I601_3247
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Entry
I601_3247 CDS
T04431
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00260
Glycine, serine and threonine metabolism
ndk00630
Glyoxylate and dicarboxylate metabolism
ndk00670
One carbon pool by folate
ndk00785
Lipoic acid metabolism
ndk01100
Metabolic pathways
ndk01110
Biosynthesis of secondary metabolites
ndk01200
Carbon metabolism
Module
ndk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
I601_3247 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I601_3247 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
I601_3247 (gcvP)
00670 One carbon pool by folate
I601_3247 (gcvP)
Enzymes [BR:
ndk01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
I601_3247 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Neocarzinostat
Motif
Other DBs
NCBI-ProteinID:
ANH39654
UniProt:
A0A1A9GMZ5
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All DBs
Position
3402072..3404951
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AA seq
959 aa
AA seq
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MSDHPSLAQLDAASPFVDRHIGLRPDDVATMLDRLGFSSLEDLMDAAVPGGIRQVGDLDL
PAPISEAETARELRALAAANRPAEAMIGLGYHATITPPVVRRNVLEDPAWYTAYTPYQPE
ISQGRLEALINFQTVVGDLTGLPTANASLLDEGTAAAEAMTLVRRGNRKAQGPFVVDADA
LPQTIDVIRTRAEGLGIEVVVADLASGLPEGELCGVLVQYPGASGRVLDPRPIIEATHER
GALAVVAADLLALTLVESPGSMGADVVIGSSQRFGVPLFYGGPHAGFMSVASGLERHLPG
RLVGVSVDAEGRPAYRLALQTREQHIRRDKATSNICTAQVLLAVVASMYAVYHGPDGLRA
IATRTHRYAAVLAAALGEAGHPVAHESFFDTLTVPVPGRAEAVVDTARELGLHLRLVDAD
TVGVSTSETTTTSSLVRVLQAFTAAAPDGDSLEALDRVTGDALPAALLRETEYLTHEVFS
LHRSETQMLRYLRRLSARDYALDRGMIPLGSCTMKLNATTEMEPVSLPGFADLHPFAPAQ
DAEGYRELVAQLEAWLGEVTGYDRVSIQPNAGSQGELAGLLAIRGYHHANGDTARDVCLI
PSSAHGTNAASAVMAGMRVVVVKAGDDGSVDLDDLRAQCEKHADELAAIMVTYPSTHGAY
EESITDLCRVVHEHGGQVYVDGANLNALLGYAKPGEFGGDVSHLNLHKTFCIPHGGGGPG
VGPVAVRAHLAPYLPSHAMHPEADKRTGIGPISAAPYGSAGILPISWAYVRMMGAEGLTR
ATASAVLSANYVAARLGEHYPVLYRGHSDLVAHECILDVRGLTKETGVSIDDVAKRLVDY
GFHAPTMSFPVAGTLMVEPTESEDLAEIDRFCEAMIAIRGEIDRVAAGDWSPERSPLRGA
PHTARCLVGEWDRDYPRDLGVFPTGIDPDKYWPPVARIDQAYGDRNLVCACPPLEAFAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaccacccctcactcgcccagctcgacgccgcgtcgccgttcgtcgaccggcac
atcgggctacgccccgacgacgtcgcgaccatgctcgaccggctcggcttctcctcgctc
gaggacctgatggacgccgccgtaccgggcgggatccgccaggtcggcgacctggacctg
cctgcgccgatcagcgaggccgagaccgcccgcgagctgcgtgccctggcggcggcgaac
cgtccggccgaggcgatgatcgggctgggctaccacgcgacgatcacgccgccggtcgtg
cggcgcaacgtgctcgaggatcccgcctggtacaccgcctacacgccctaccagccggag
atctcccagggccgtctcgaggcgctgatcaacttccagaccgtggtcggtgacctgacc
ggtctgcccaccgccaacgcctccctcctcgacgagggcacggcggccgcggaggcgatg
acgctggtgcgtcgaggcaaccgcaaggcccaggggccgttcgtggtcgacgccgacgcg
ctgccgcagaccatcgacgtgatccggacccgggccgaggggctcggcatcgaggtcgtc
gtcgccgatctggcctcgggcctgcccgagggcgagctgtgcggcgtgctggtgcagtac
cccggtgcgtccggtcgggtcctcgacccccgccccatcatcgaggcgacccacgagcgt
ggcgcactggcggtggtggccgccgacctgctggcgctgaccctggtggagtcgcccggc
tccatgggtgctgacgtcgtgatcggttcctcgcagcgcttcggcgtcccgctgttctac
ggcggcccgcacgccggcttcatgtcggtggcctcgggcctcgagcggcacctgcccggg
cggctggtcggggtctccgtcgacgccgaggggcgtccggcgtaccgcttggccctgcag
acccgtgagcagcacatccgtcgtgacaaggccacctccaacatctgcaccgcccaggtg
ctgctggccgtggtcgcctccatgtacgccgtctaccacggtcccgacggcctgcgggcg
atcgcgacgcgcacccaccggtacgccgccgtcctggccgcggccctgggcgaagccggc
cacccggtcgcgcacgagagcttcttcgacaccctcaccgtcccggtgccgggccgcgcc
gaggcggtcgtcgacacggcccgcgagctgggcctgcacctgcgcctggtcgacgccgac
accgtgggcgtctccacctccgagaccacgaccacctccagcctggtccgggtcctccag
gccttcaccgccgcggcgcccgacggcgactcgctcgaggcgctcgaccgggtcaccggg
gacgcgctgccggccgcgctgctccgcgagacggagtacctgacccacgaggtgttctcg
ctgcaccgcagcgagacccagatgctgcgctacctgcgccggctctccgcgcgagactac
gcgctggaccgggggatgatcccgctcggctcctgcaccatgaagctcaacgccaccacc
gagatggagccggtctcgctgcccgggttcgccgacctgcaccccttcgccccggcgcag
gacgccgagggctaccgcgagctcgtcgcgcagctggaggcctggctgggcgaggtcacc
ggctacgaccgggtctcgatccagcccaacgccggctcgcagggcgagctggccgggctg
ctggccatccgcggctaccaccacgcgaacggcgacaccgcccgggacgtctgcctgatc
ccgagctccgcgcacggcaccaacgccgcgtcggcggtgatggcggggatgcgggtcgtg
gtggtcaaggccggtgacgacgggtcggtcgacctcgacgacctgcgggcgcagtgcgag
aagcacgccgacgagctggccgcgatcatggtcacctacccctccacgcacggtgcctac
gaggagtcgatcaccgacctgtgccgggtcgtgcacgagcacggcggccaggtctacgtc
gacggggccaacctcaacgcgctcctcggctacgccaagcctggcgagttcggcggcgac
gtgtcgcacctgaacctgcacaagacgttctgcatcccccacggtggtggcgggccgggc
gtcgggccggtcgccgtgcgcgcccacctcgcgccgtacctgccctcgcacgcgatgcac
cccgaggcggacaagcgcaccggcatcggcccgatctcggcggcgccgtacggctcggcg
gggatcctgccgatctcgtgggcctacgtgcggatgatgggcgcggagggactgacccgg
gccaccgcctcggcggtgctctcggccaactacgtcgccgcccggctcggcgagcactac
ccggtgctctaccgcgggcacagcgacctggtcgcccacgagtgcatcctggacgtgcgg
gggctgaccaaggagaccggcgtcagcatcgacgacgtggccaagcgcctcgtggactac
ggcttccacgccccgacgatgtccttcccggtggccggcaccctgatggtcgagccgacc
gagtccgaggacctcgccgagatcgaccggttctgcgaggcgatgatcgcgatccggggt
gagatcgaccgcgtggcagccggcgactggagcccggagcgctcgccgctgcggggcgct
ccgcacaccgctcggtgcctggtgggggagtgggaccgcgactacccccgagacctcggt
gtcttcccgaccggcatcgaccccgacaagtactggccgccggtggcccggatcgaccag
gcctacggcgaccgcaacctggtgtgcgcctgcccgccgctcgaggcgttcgccgagtga
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