Nocardioides dokdonensis: I601_3646
Help
Entry
I601_3646 CDS
T04431
Symbol
hrdB_2
Name
(GenBank) RNA polymerase principal sigma factor HrdB
KO
K03086
RNA polymerase primary sigma factor
Organism
ndk
Nocardioides dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I601_3646 (hrdB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndk03021
]
I601_3646 (hrdB_2)
Transcription machinery [BR:
ndk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I601_3646 (hrdB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
FBF1
Motif
Other DBs
NCBI-ProteinID:
ANH40052
UniProt:
A0A1A9GQY1
LinkDB
All DBs
Position
3818294..3819277
Genome browser
AA seq
327 aa
AA seq
DB search
MATSTATRTAARTVTASTGREIEGRDSVGLYLDEIARNPLLDAAAEVDLSQTIEAGLYAE
ALLKEGRVGRRKGGAPGRASEEELEWLAEQGRQAVDTFITANLRLVVSIARKYGRAQMPM
LDLIQEGNTGLIRAVEKFDYTKGYKFSTYATWWVRQAITRGIAQQARVVRLPVHVVEELN
QVGGARRTLERQLGRDPEPGEIALELGMDVDRVLDLLAWGREHVSLDTPVDEDGDTSLGD
LMAQETSPGPDLSVIDVESRDRLNALVCHLDDRAADIIRSRYGLSDGRQHKLADIGAKHG
ISAERVRQLEREALQKLRRFADPDLAA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagcaccgccacccgcacggctgctcgcaccgtcacggccagcaccggtcgt
gagatcgagggccgcgacagcgtcgggctctacctggacgagatcgcccgcaacccgctg
ctcgacgcggccgcggaggtggacctgtcccagaccatcgaggcgggcctctacgccgag
gccctgctgaaggagggtcgcgtggggcgccgcaagggcggagcccccggccgcgccagc
gaggaggagctcgagtggctcgccgagcaggggcgccaggccgtcgacaccttcatcacc
gccaacctgcgcctcgtcgtgtccatcgcgcgcaagtacggccgcgcccagatgccgatg
ctggacctgatccaggagggcaacaccggcctgatccgggcggtcgagaagttcgactac
accaagggctacaagttctccacctacgcgacctggtgggtgcgccaggcgatcacccgt
ggcatcgcccagcaggcccgcgtcgtgcggctgccggtgcacgtggtcgaggagctcaac
caggtcggcggcgcccgtcggaccctggagcgccagctgggtcgcgacccggagcccggc
gagatcgcgctggagctcggcatggacgtcgaccgcgtcctcgacctgctggcgtggggt
cgcgagcacgtctcgctcgacacccccgtcgacgaggacggcgacacctcgctgggcgac
ctgatggcgcaggagacctcgccgggtcccgacctgagcgtcatcgacgtcgagtcgcgc
gaccggctgaacgccctggtctgccacctggacgaccgggccgccgacatcatccgttcg
cgctacggcctcagcgacggacgccagcacaagctggccgacatcggcgccaagcacggc
atctccgccgagcgggtgcgccagctcgagcgggaggcgctgcagaagctgcgtcgcttc
gccgacccggacctggctgcctga
DBGET
integrated database retrieval system
