Nocardioides dokdonensis: I601_3667
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Entry
I601_3667 CDS
T04431
Symbol
polA_2
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk03030
DNA replication
ndk03410
Base excision repair
ndk03420
Nucleotide excision repair
ndk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I601_3667 (polA_2)
03410 Base excision repair
I601_3667 (polA_2)
03420 Nucleotide excision repair
I601_3667 (polA_2)
03440 Homologous recombination
I601_3667 (polA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndk03032
]
I601_3667 (polA_2)
03400 DNA repair and recombination proteins [BR:
ndk03400
]
I601_3667 (polA_2)
Enzymes [BR:
ndk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I601_3667 (polA_2)
DNA replication proteins [BR:
ndk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I601_3667 (polA_2)
DNA repair and recombination proteins [BR:
ndk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I601_3667 (polA_2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I601_3667 (polA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ANH40073
UniProt:
A0A1A9GR31
LinkDB
All DBs
Position
complement(3846414..3849134)
Genome browser
AA seq
906 aa
AA seq
DB search
MPETTSPARPRLLLLDGHSLAYRAFFALPVENFSTTTGQHTNAVYGFTSMLINVLRDEQP
THVGVAFDVSRQTFRLAEYSEYKAKRNKTPSEFGSQLPLIEEVLDALRIPFLKKDGYEAD
DIIATLVTQALADDPEMEVLILTGDRDALQLVTERSTVLYPMRGVSDLARMTPEAVETKY
GVPPARYPELAAIVGETSDNLPGVPGVGQGFAAKWINTYDGLDNVITHADKITGKKGEAL
RAHLGDVMRNRRLNALVCDLDLELRPAELALRPWDRQEVHTLFDGLEFRVLRDRLFETLT
SEEVVDGTGFEVTGVRLAPGQVAGWLAEHAADRVGLVVQGTWRAGSGEVHSLALAADDGT
AAWFDAAEVSPDDDGAVAAWLADEQRPKVLHDAKGPMLALAARGWPLAGLQSDTALAAYL
VRPDQRSYELGDLTLRYLKRELKQGSADDGQLSLDSLDAGLDAGLDGVGDDAAQTAMLHA
RAVLDLAEALDEAVAEHGGTELLAKVELPLVHLLARMETTGIAVDTDHLESLESHFAGEV
RGAADAAYAVIGKEINLGSPKQLQAVLFDELAMPKTKRTKTGYTTDADALQALYVKTEHP
FLLHLLRHRDVIRLRQTIEGLLKTVASDGRIHTTFNQTIAATGRLSSTDPNLQNIPVRTE
EGRRIREAFVVGAGHESLMTADYSQIEMRIMAHLSEDALLIEAFRSGSDFHSITAARVFD
MPAEQVGTEERAKIKAMNYGLAYGLSAFGLGQQLGIEPAEARGLMDEYFETFGGIRDYLG
GIVEEARRTGYTETIEGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIKIAMLRV
QQRIEEAGLASRMLLQVHDELVLEVAPGEREVLEALVREQMGAAAALAVPLDVSVGTGHS
WHDAAH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagacgacctcccccgcccgaccgcgactgctcctcctggacggtcactccctg
gcctaccgggccttcttcgcgctgccggtggagaacttctcgaccacgacgggccagcac
accaacgccgtctacggcttcacctcgatgttgatcaacgtgctgcgcgacgagcagccc
acccacgtcggtgtcgccttcgacgtctcgcgccagaccttccggttggcggagtactcc
gagtacaaggccaagcgcaacaagaccccgagcgagttcgggagccaactgccgctgatc
gaggaggtcctcgacgccctgcggatccccttcctgaagaaggacggctacgaggccgac
gacatcatcgcgaccctggtcacccaggccctggccgacgaccccgagatggaggtcctc
atcctcaccggggaccgcgacgcgctgcagctggtcaccgagcgctccaccgtgctctac
ccgatgcgcggcgtctccgacctcgcccggatgacccccgaggccgtcgagacgaagtac
ggcgtcccgcccgcccgctaccccgagctggccgcgatcgtgggggagacctccgacaac
ctgcccggcgtcccgggcgtgggtcaggggttcgcggcgaagtggatcaacacctacgac
ggcctcgacaacgtcatcacccatgccgacaagatcaccggcaagaagggagaggccctg
cgtgcccacctcggtgacgtgatgcgcaaccgccggctcaacgccctggtctgcgacctc
gacctcgagctccggcccgccgagctcgcgctgcgtccctgggaccgccaggaggtgcac
accctcttcgacgggctcgagttccgggtgctgcgcgaccggctcttcgagacgctgacc
tctgaggaggtcgtcgacggcaccgggttcgaggtcaccggggtccggctggcgcccggc
caggtggccggctggttggccgagcacgccgcggaccgggtcggtctcgtcgtgcagggc
acgtggcgcgccggcagcggcgaggtgcactcgttggccctggccgccgacgacggcacc
gcggcgtggttcgacgccgccgaggtcagccccgacgacgacggcgccgtggcggcctgg
ctggccgacgagcagcggcccaaggtcctgcacgacgcgaagggcccgatgctggcgttg
gccgcccgcggctggccgctggcggggctgcagtccgacacggcgctggcggcctacctg
gtgcgccccgaccagcgctcctacgagctgggcgacctgaccctgcgctacctcaagcgg
gagctcaagcagggcagcgccgacgacggacagctcagcctcgacagcctcgacgccggg
ctcgacgcgggtctcgacggggtgggtgacgacgccgcgcagaccgcgatgctccacgcc
cgcgccgtgctcgacctggccgaggccctcgacgaggccgtggccgagcacggcggcacc
gagctgctcgcgaaggtcgagctgccgctggtgcacctgctggcgcgcatggagacgacc
ggcatcgccgtcgacaccgaccacctcgagtcgctcgagtcccacttcgcgggcgaggtc
cgcggcgccgcggatgcggcgtacgccgtgatcggcaaggagatcaacctcggctcgccg
aagcagctccaggcggtcctgttcgacgagctggcgatgccgaagaccaagcgcaccaag
accgggtacaccaccgacgccgatgcgctgcaggcgctctacgtcaagaccgagcacccg
ttcctgctgcacctgctgcggcaccgcgacgtcatccggctgcgccagaccatcgagggc
ctgctcaagaccgtggcctccgacgggcggatccacaccacgttcaaccagaccatcgcc
gccaccggtcggctctccagcaccgacccgaacctgcagaacatcccggtgcgcaccgag
gagggccgacgcatccgcgaggccttcgtggtgggtgcgggccacgagtcgctgatgacg
gccgactacagccagatcgagatgcggatcatggcgcacctctccgaggacgcgttgctc
atcgaggcgttccgctccggcagcgacttccactcgatcaccgcggcccgggtcttcgac
atgcccgccgagcaggtcgggacggaggagcgcgcgaagatcaaggcgatgaactacggc
ctggcctacgggctgtccgccttcgggctgggccagcagctgggcatcgagccggccgag
gcccgcgggttgatggatgagtacttcgagaccttcggcggcatccgcgactacctcggc
gggatcgtcgaggaggctcggcgcaccggctacaccgagaccatcgagggtcggcgccgc
tacctgcccgacctgaccagcgacaaccggcagcgtcgcgagatggccgagcggatggcg
ctcaacgcacccatccagggctcggccgccgacctgatcaagatcgcgatgctgcgggtg
cagcaacgcatcgaggaggccggcctggcctcgcggatgctgctgcaggtccatgacgag
ctcgtgctcgaggtggcgcccggcgaacgggaggtcctcgaggccctggtgcgcgagcag
atgggggcggcggcagcgctcgcggtcccgctcgacgtctccgtcggcaccgggcacagc
tggcacgacgccgcgcactga
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