Nocardioides dokdonensis: I601_3694
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Entry
I601_3694 CDS
T04431
Symbol
msbA_3
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
ndk
Nocardioides dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndk02000
]
I601_3694 (msbA_3)
Transporters [BR:
ndk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
I601_3694 (msbA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
DUF87
AAA_16
SMC_N
AAA_22
Zeta_toxin
AAA_21
AAA_29
AAA_24
AAA_18
nSTAND3
AAA_25
MMR_HSR1
Sigma54_activat
NACHT
DEAD
Mg_chelatase
AAA_5
APS_kinase
AAA_7
DUF5906
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ANH40099
UniProt:
A0A1A9GP65
LinkDB
All DBs
Position
complement(3878674..3880497)
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AA seq
607 aa
AA seq
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MSAVRAASSSGTELDTGEEMRALETIRRGLHHSPELTIGIRGTLAYAVLASAGQVVVPVA
VQQTLDRGLGADAGPDLAFTAWMGVVAGLAIVLTSWASYKMTSRLFRTAEGGLATLRTKA
FRHVHDLPLLTQNTERRGALVARVTSDVDQVSQFLVFGGLLFVVSIGQVVIATIVMLVYS
WQLTLVVWLCFAPLFMSLKYFQRKLSLAYGIVRNQVGVMLSAISEPVVGAAVVRSYAVQS
RTQDRIDRAVDAHRAASTRAQGFTAFSFSLGGVSAGLANAGVIVIGVLLGLAGDISAGEV
LAFAFLVTLFVGPVQMGTQILTDAQLAIAGWRRVIGILDTPADLVDPGPAGHDLPPGPID
VRFDEVTFSYPGGPPVLRDVDMSIDAGRRVAIVGETGSGKSTFAKLLTRLMDPSEGAVLL
DGVDVRDIAQATLRRSVVLVPQEGFLFDDTITANVRYGKLDATAEDILASADELGLGDWL
AGLPRGLDTRVGQRGESLSAGERQLVALLRAHLADPDLLVLDEATSAVDPSLEMRIGRAL
ERLMSGRTSVTIAHRMSTAEAADEVVVVDQGHIVQRGPHAELVTQEGSVYAGLHASWVAQ
QGHPGSS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtccgcgccgcctcgagctcgggcaccgagctcgacaccggcgaggagatg
cgcgcgctggagaccatccggcgcgggctgcaccactcgcccgagctgaccatcggcatc
cggggcaccctggcctacgcggtgctggcctccgcgggccaggtcgtcgtcccggtcgcg
gtgcagcagaccctcgaccgcggcctgggtgccgacgccggtccggacctggcgttcacg
gcctggatgggtgtggtcgccgggttggcgatcgtgctgacctcctgggcctcgtacaag
atgaccagccggctgttccgcaccgccgagggcggcctggccacgctgcgcacgaaggcc
ttccgccacgtccacgacctgccgctgctgacccagaacaccgagcgccgcggggccctc
gtggcgcgggtcaccagcgacgtcgaccaggtcagccagttcctggtcttcggcggcctg
ctcttcgtggtcagcatcggccaggtggtgatcgcgaccatcgtgatgctcgtctactcc
tggcagctcacgctcgtcgtctggttgtgcttcgccccgctgttcatgtcgctgaagtac
ttccagcgcaagctgtccctggcctacggcatcgtgcgcaaccaggtcggcgtgatgctc
tcggcgatctccgagccggtcgtcggcgccgccgtcgtgcggtcgtacgccgtgcagtcg
cggacccaggaccgcatcgaccgggccgtcgacgcgcaccgcgccgccagcacccgggcg
caggggttcacggcgttctcgttctcgctcggtggcgtctcggcgggcctggccaacgcc
ggggtgatcgtgatcggcgtgctgctcggcctcgccggcgacatcagcgcgggcgaggtg
ctcgccttcgccttcctggtcaccctcttcgtgggccccgtgcagatgggcacccagatc
ctcaccgacgcccagctcgcgatcgcgggctggcgccgggtgatcggcatcctcgacacc
ccggccgacctcgtcgaccccggcccggccggccacgacctgccgccgggaccgatcgac
gtccggttcgacgaggtcaccttctcctaccccggtggcccaccggtgctgcgcgacgtg
gacatgtcgatcgacgccgggcgccgggtcgccatcgtcggcgagaccgggtcgggcaag
tcgacgttcgccaagctgttgacgcggctgatggaccccagcgagggcgccgtgctgctc
gacggggtggacgtgcgcgacatcgcccaggcgacgctgcgccgaagcgtggtgctggtg
cctcaggagggtttcctcttcgacgacacgatcaccgccaacgtgcgctacggcaagctc
gacgccacggccgaggacatcctcgccagcgccgacgagctcggtctcggggactggctg
gccgggctgccgcgcgggttggacacccgggtcggccagcggggcgagtccctgtcggcc
ggggagcgccagctggtcgccctgctgcgcgcgcacctcgccgaccccgacctgctggtc
ctcgacgaggccaccagtgccgtggacccctcgttggagatgcgcatcggccgggccctg
gaacggctgatgagcgggcgcacctcggtgaccatcgcgcaccgcatgtcgacggccgag
gctgccgacgaggtcgtggtggtcgaccagggccacatcgtccagcgcggcccgcatgcc
gagctggtgacgcaggagggctcggtgtacgccggcctgcacgcctcgtgggtcgcccag
cagggacatccgggcagctcctga
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