Nocardioides dokdonensis: I601_3961
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Entry
I601_3961 CDS
T04431
Symbol
sigF_2
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ndk
Nocardioides dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndk03021
]
I601_3961 (sigF_2)
Transcription machinery [BR:
ndk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I601_3961 (sigF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
MarR
KORA
DUF7343
Motif
Other DBs
NCBI-ProteinID:
ANH40358
UniProt:
A0A1A9GQ00
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All DBs
Position
4178990..4179865
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AA seq
291 aa
AA seq
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MPPSTPAERPVPVPALLPGEAPPDPPEPRDDATRRRLGIEATRRRSAELFLVLRDEESTE
PARAGARDSLVHLHLPLVEHCARRFRNRGEPFEDLVQVGTIGLIKSVDRFDCDRGVEFST
YATPTIIGEIKRYFRDKGWAIRVPRRLQELRMQIGTATAELTQSLGRSPTMAELAGVIGC
SVEEIIEGIESSNAYSTLSLDASDDGDDGSATMLDAIGVDDAGLEHVEIRESLKPLLDRL
EPREKKILLLRFFKNQTQSQIAEEIGVSQMHVSRLLSRTLDQLRSSLETAD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgcccccctccacccccgcggagcgaccggtcccggtccccgccctcctgcccggcgag
gcaccccccgacccgcccgagccccgcgacgacgccacccggcgccgcctgggcatcgag
gccacccgtcgacgcagtgccgagctgttcctggtcctgcgtgacgaggagtccaccgag
cctgcccgcgccggcgcccgggactccctggtgcacctgcacctgccgctcgtcgagcac
tgcgcgcgccgcttccgcaaccgcggggaacccttcgaggacctcgtccaggtcggcacg
atcgggctcatcaagtccgtggaccgcttcgactgcgatcgcggcgtggagttctccacc
tacgcgacgcccacgatcatcggcgagatcaagcgctacttccgggacaagggctgggcc
atccgggtgccccggcggctgcaggagctgcggatgcagatcggcaccgccaccgccgag
ctgacccagtcgctgggccgctcccccacgatggccgagctggccggggtgatcggctgc
agcgtcgaggagatcatcgagggcatcgagtcctccaacgcctactcgacgctctccctc
gacgccagcgacgacggggacgacggctccgcgacgatgctggacgcgatcggcgtggac
gacgcagggctcgagcacgtggagatccgcgagtcgctcaagccgctgctcgaccggctg
gagccacgggagaagaagatcctgctgctgcggttcttcaagaaccagacccagtcgcag
atcgccgaggagatcggggtctcccagatgcacgtgtcccggctgctcagccgcaccctc
gaccagctgcgcagctcgctcgagaccgccgactga
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