Neisseria dentiae: H3L92_04795
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Entry
H3L92_04795 CDS
T07671
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ndn
Neisseria dentiae
Pathway
ndn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H3L92_04795 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndn03400
]
H3L92_04795 (recD)
Enzymes [BR:
ndn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H3L92_04795 (recD)
DNA repair and recombination proteins [BR:
ndn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H3L92_04795 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
Helicase_RecD
SH3_13
UvrD-helicase
nSTAND3
T2SSE
AAA_16
SLFN-g3_helicase
PhoH
SRP54
AAA
Xre-like-HTH
NTPase_1
AAA_28
ATPase
Motif
Other DBs
NCBI-ProteinID:
QMT46100
LinkDB
All DBs
Position
complement(1014545..1016314)
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AA seq
589 aa
AA seq
DB search
MPQETAADLNQAAADAAIELLQRHAPEEAATAVPYVRKLFEALSDGHAFIWLNDADVAAL
RQIPGVAGGSGMPLILSGKRLFLGRVWQLERDLAQEIVRLAAAKTEPVDWMQAGQNLAQW
FAGANSEGQRDAAALALRQPFILISGGPGTGKTTTVAKLLGLLCSNGGRLPRIALAAPTG
KAAAHMARALHHAAGTFGLPDTVRRHLLQLEGQTVHRLLKLRPPQMQPAFHREQPLPLDV
LVIDEASMLDLALMLQLLRAVPSGCRVILLGDENQLPSVGAGAVLAELAQETLLNTATAQ
ELSAMLPRHGFKVSGNPPPLSANTARLHFSHRFGDNSGIGCLARAIAAGDAENAWAQFAC
FPDTLGVREGSLKQQAEAFYEQQAAYWQAVVSGDVEQAFRRQTDTVVLAAWREDAAAFNE
AYRRCLHRHGLARADAPWFAGQVVMVSRNDYALDLFNGDIGLILPDPSRPGTLAAYFPAA
GGQRTVPLSRLPAHETAFAITVHKSQGSEYGEVWLLPPSAPDGSPHGLNRALLYTAVTRA
RERFVFWGGRTAFKTACATQENRRSALREMIARETEKQVGTLVQSMPSF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagaaaccgccgccgatttaaaccaagccgccgccgatgccgcgattgaacta
ttgcagcggcacgcacccgaagaggccgccaccgccgtaccgtatgtgcgcaaactgttt
gaagcactttcagacggccacgcctttatttggttaaacgatgccgacgtggcggctttg
cggcagattcccggcgtggcgggcggcagcggtatgccgctgatactctcgggcaagcgg
ctgtttctcggcagagtgtggcagcttgagcgcgacttggcgcaggaaatcgtgcgcttg
gctgcggcaaaaaccgaacccgtcgactggatgcaggccgggcagaatctggcgcaatgg
tttgccggcgcaaacagcgaaggccagcgcgatgccgctgcactggctctgcggcaaccg
tttatcttaatcagcggcgggccgggcacgggcaaaaccaccaccgtggccaaactgctt
gggctgttgtgcagcaacggcggcaggctgccgcgcatcgcgctggccgcacccacgggc
aaggccgccgcccatatggcgcgggcgctgcaccatgctgccggcactttcgggctgccc
gacaccgttcgccgccacctgctgcaactcgaaggccaaaccgtacaccgcctgttgaaa
ctgcgtccgccgcagatgcagcccgccttccaccgcgaacagccgctgccgctggacgtg
ctggttatcgatgaggcttcgatgctcgaccttgccctgatgctgcaactgctgcgcgcc
gtgccttcgggttgccgcgttattctgctgggcgacgaaaaccaactgccctcggtgggt
gcgggcgcggttttggccgaactggcgcaagaaaccctgttaaacacggcaaccgcgcaa
gagctgtcggccatgctgccccggcacggctttaaagtttccggcaacccgccgcccttg
tcggcaaatactgcccgcctgcatttcagccaccgcttcggcgacaacagcggtatcggc
tgcttggcacgcgccattgcggcgggagacgcagaaaacgcatgggcgcagttcgcctgc
ttccccgacacgctcggcgtgcgcgaaggcagcctcaaacaacaggccgaagccttttac
gaacaacaggccgcttattggcaggcggtggtttctggtgatgttgaacaggcattccgc
cgccaaaccgacaccgtggtgctggcggcttggcgcgaagatgccgccgcattcaacgaa
gcctaccgccgctgcctgcatcggcacggcttggcgcgcgccgacgcaccgtggttcgcc
gggcaggtggtgatggtgtcgcgcaacgattacgcgctcgatttatttaacggcgacatc
ggcctgattctgcccgaccccagccgccccggcacgctggccgcctattttcccgccgcc
ggcgggcagcgcaccgtgccgttaagccgcctgcccgcccacgaaaccgcattcgccatc
accgtacacaaaagccaagggtcggaatacggcgaagtgtggctgctgccgccttccgcc
ccggacggcagcccgcacggccttaaccgcgccctgctctacaccgccgttacccgcgcc
cgcgaaaggtttgtattctggggcggccgcaccgcttttaagacggcctgcgccacacag
gaaaaccgccgcagcgcattacgggaaatgattgccagagaaacggaaaaacaggtcgga
actttggtgcaatccatgccgtcgttttaa
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