KEGG   Neisseria dentiae: H3L92_09200
Entry
H3L92_09200       CDS       T07671                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
ndn  Neisseria dentiae
Brite
KEGG Orthology (KO) [BR:ndn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ndn03021]
    H3L92_09200 (rpoH)
Transcription machinery [BR:ndn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H3L92_09200 (rpoH)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r1_2 HTH_3 UCR_14kD HTH_AsnC-type HTH_PafC HTH_24 HTH_25 HTH_31
Other DBs
NCBI-ProteinID: QMT46519
LinkDB
Position
complement(1950698..1951558)
AA seq 286 aa
MNNAFALPVPSGHGSLEQYIHTVNNIPMLSAEEETRLAERQQKGDLEAAKQLILSHLRVV
VSIARGYDGYGLNQADLIQEGNIGLMKAVKRFEPTRGARLFSFAVHWIKAEIHEFILRNW
RLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQEIADDLGVKLSEVLEMEQRMTGRDIG
IMADNSDDEDSFAPIDWLADNDTEPTRQIAQKAHYALQTEGLQNALAQLDDRSRRIVESR
WLQDDGGLTLHDLAAEYGVSAERIRQIEAKAMQKLRGFLAEEAEAV
NT seq 861 nt   +upstreamnt  +downstreamnt
atgaataacgcctttgcattacccgtacccagcggtcacggcagcttggagcagtacatt
cataccgtaaacaacattcccatgctttctgccgaagaagaaacccggctggcagaacgc
caacagaaaggcgacctcgaggccgccaagcaactgattctttcgcacctgcgcgttgtc
gtatcgattgcgcgcggctacgacggctacggcctcaaccaagccgacctgattcaagaa
ggcaatatcggcctgatgaaggcggtgaaacgtttcgagcctacccgcggcgcgcgcctg
ttttcgtttgccgtgcattggattaaggccgaaatccacgaattcatcctgcgcaactgg
cgcctggtgcgcgtggccaccaccaaaccgcagcgcaaactgtttttcaacctgcgcagc
atgcgtaaaaacctcaacgccttaagccccaaagaagcacaggaaatcgccgacgatttg
ggcgtgaaactttcagaagtgctcgagatggaacagcgcatgaccggccgcgacatcggc
attatggccgacaacagcgacgatgaagacagcttcgcccccatcgactggctggccgac
aacgataccgagccgacccgccaaatcgcccaaaaagcccactacgccctgcaaaccgaa
ggcttgcaaaacgcgttggcgcaattggacgaccgcagccgccgcatcgtcgaaagccgc
tggctgcaagacgacggcgggctgaccctgcacgacttggccgcagaatacggcgtatcc
gccgagcgcatccgccaaatcgaagccaaagccatgcagaaactgcgcggtttccttgcc
gaagaggccgaagccgtttaa

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