Neisseria dentiae: H3L92_12440
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Entry
H3L92_12440 CDS
T07671
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ndn
Neisseria dentiae
Brite
KEGG Orthology (KO) [BR:
ndn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndn03016
]
H3L92_12440
Enzymes [BR:
ndn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H3L92_12440
Transfer RNA biogenesis [BR:
ndn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H3L92_12440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QMT45184
LinkDB
All DBs
Position
complement(2658089..2659951)
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AA seq
620 aa
AA seq
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MNIFYEESGQFKVAAVVQKNDATYQADTQHGKRTKVKAANVFVEFDTPMDAFLAQAQAEA
AEIDTDLLWEVCGEEEFSAEAIAEEYFGHAPAKTELAATLIALYAAPMYFYKKAKGIFKA
APEETLKQALAAVERKKQQDAQIEAWSEALKQGEMPSEIAADLKTILHAPDKQAPTYKAF
TKAADALKLAPLELAMQTGGVASIPQYLRDGFEVKHFPKGTAFANMPVPALPALPQAAVQ
AFSIDDEDTTEVDDALSVTDLGNGTKRVGIHIAAPALAVASGSAIEKTIMERLSTVYFPG
GKITMLPDNWIAAFSLDAGGHRPAVSIYFDVDADFNISAPVHKIEAVYIAENLRIQAIEP
HFNAETGLDAEGQAMFNHHQDLIWLHRFAIARQKARGKYEPDRAPQYDYGIGLNEDGSVA
VSRRERGSPIDTLVSEMMILANSTWAQMLDENSLPGLFRVQPGNSKVRMSTQSEPHSGMG
VQHYGWFTSPLRRAADYINQKQLLSLINSEAEPLFHSNDTALFAALRDFDAAYTAYADFQ
RKMEGYWSLVYIRQQGLKELKATLLKEDLVRIDGLPLAVRATGIPFDALPKSQLLLSVAE
VDADKQFIALNYLKMLPPAA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaacattttttacgaagaatccggccaattcaaagtggccgccgtggtgcagaaaaac
gacgccacctatcaggccgatacccagcacggcaaacgcaccaaagtgaaagcggccaac
gtgtttgtcgaattcgacaccccgatggacgcattcctcgcccaagcccaggccgaagcc
gccgaaatcgacaccgacctgttgtgggaagtgtgcggcgaagaagaattcagcgccgaa
gccatcgccgaagaatacttcggccacgcgcccgccaaaaccgagctggcggccacgctg
attgcgctttatgccgcaccgatgtatttctataaaaaagccaaaggcatcttcaaagcc
gcccccgaagaaacactcaaacaggcgctggcggcggtggagcgtaaaaaacagcaggac
gcgcaaatcgaagcctggtcggaagcactcaagcagggcgagatgccgtctgaaatcgcc
gccgacctgaaaaccatcctgcacgcgcccgacaaacaggcgcccacctacaaagccttc
accaaagccgccgacgcgctcaaactcgccccgctggagctggccatgcaaaccggcggc
gtcgcctcgattccgcaatacctgcgcgacggtttcgaagtcaaacactttcccaaaggc
acggcctttgccaatatgcccgtgcccgcgctgccagcactgccgcaggccgctgtgcag
gcgttttccatcgacgacgaagacaccaccgaagtggacgacgccttaagcgttaccgat
ttgggcaacggcaccaaacgcgtgggcatccacatcgccgcacccgcgctggccgttgcc
tcgggcagcgccatcgaaaaaaccattatggagcgcctgagcacggtgtattttcccggc
ggcaaaatcaccatgctgcccgacaactggattgccgccttcagcctcgatgccggcggc
caccgccccgccgtgagcatttatttcgacgttgacgccgatttcaacatcagcgcgccc
gtgcacaaaatcgaagccgtttatatcgccgaaaacctgcgcatccaagccatcgagccg
cacttcaacgccgaaaccggcctcgatgccgaagggcaggccatgttcaaccaccatcag
gatttaatctggctgcaccgcttcgccatagcccgccaaaaagcgcgcggcaaatacgag
ccggaccgcgccccgcaatacgattacggcatcgggttgaacgaagacggcagcgtggcc
gtttcccgccgcgagcgcggctcgcccatcgacacgctggtgagcgaaatgatgatactc
gccaacagcacatgggcgcagatgctcgatgaaaacagcctgcccggccttttccgcgtg
cagcccggcaacagcaaagtgcgcatgagcacccaatccgaaccgcacagcggcatgggc
gtgcagcactacggctggttcacctcgccgctgcgccgcgccgccgactatatcaaccaa
aagcagctgctcagcctgataaacagtgaagccgagccgctgtttcacagcaacgacacc
gccctgttcgccgccctgcgcgatttcgacgcggcctacaccgcctatgccgatttccag
cgcaaaatggagggctactggagcttggtgtatatccgccagcaggggttgaaagagctg
aaggccacgctgctgaaagaagatttggtgcgcatcgacggcctgccgctggccgtgcgc
gccacaggcattccgtttgacgcgctgcccaaatcgcaactgctgctttcggtggccgaa
gtggatgccgacaagcagtttatcgctttgaattatttgaagatgctgccgcctgcggcg
tag
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