Neisseria dentiae: H3L92_12580
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Entry
H3L92_12580 CDS
T07671
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ndn
Neisseria dentiae
Pathway
ndn03030
DNA replication
ndn03410
Base excision repair
ndn03420
Nucleotide excision repair
ndn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3L92_12580 (polA)
03410 Base excision repair
H3L92_12580 (polA)
03420 Nucleotide excision repair
H3L92_12580 (polA)
03440 Homologous recombination
H3L92_12580 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndn03032
]
H3L92_12580 (polA)
03400 DNA repair and recombination proteins [BR:
ndn03400
]
H3L92_12580 (polA)
Enzymes [BR:
ndn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3L92_12580 (polA)
DNA replication proteins [BR:
ndn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H3L92_12580 (polA)
DNA repair and recombination proteins [BR:
ndn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H3L92_12580 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3L92_12580 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QMT45212
LinkDB
All DBs
Position
2687274..2690072
Genome browser
AA seq
932 aa
AA seq
DB search
MSQTLLLVDGSSYLYRAFHAMAPLTAPDGTPTGAMYGVLNMLRRLRADYVHDYCAVVFDA
KGKNFRHQMFPDYKATRPPMPDELRPQAEMLPEMVRLMGWPVLVVPDVEADDVIGTLAKQ
GEAAGWNVVVSTGDKDMAQLVSEHVTLVNTMSNEKLDIEGVKAKFGVRPDQIIDYLALMG
DKVDNVPGVEKCGPKTAVKWLEQYGTLQGVMEHAGEIKGKVGENLQAALEQLPLSYQLVT
IKTDVDLHTELSDGLESLRRSTPKWSQLAVEFKRLNFRTWLKEAEERINEGNGDLFGAAH
IGEQAALAAEQSLSENVSDGLPQTAPAPAVLNYQAVTTEAKFSALLDRLSQAEAIGIDTE
TTSLNPMEARLVGISMAFAAGDAVYIPLGHTPTAAPEQLDLNEVLGRLKPHLENAELKKI
GQNLKYDQHIFANYDIALNGIAGDAMLASYILESHLGHGLDELAERWLGLPTITYESLCG
KGAKQISFADVALEQATEYAAQDADFALRIESWLKARMDAKQLEMYQNMELPVAQVLFEM
ERNGVLIDKNELARQSHELGSELLQLEQQAYQIAGQPFNLNSPKQLQEILFDKMGIPTKG
LKKTASGGVSTNEAVLEQLAPDYPLPNIILQNRSLAKLKSTYTDKLPEMINARTGRVHTT
YAQAVAITGRLASSNPNLQNIPIRTPEGRKVRRAFTAPSGSLIVSADYSQIELRIMAHLS
GDKTLLEAFKNGEDVHRRTAAEVFGVPPENVNADQRRYAKTINFGLIYGMGQYGLAKSLG
IDNVSAKNFIDRYFARYPGVADYMQRTKEQAAAQGYVETLFGRRLYLPDIHSKNGNARAG
AERAAINAPMQGTASDLIKRAMIAVRNWLISDGLQSKLVMQVHDELVLEVAESELDLVKQ
KLPEIMAGVAEGQLDVPLVAEVGQGENWEAAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaaccctgctccttgttgacggctcttcctatctctaccgcgcttttcacgcc
atggcgcccttaaccgcgcccgacggcacgcccacgggggcgatgtacggtgtattgaat
atgctgcgccgcctgcgcgccgattatgtgcacgactattgcgcggtggtgttcgatgcc
aaaggcaaaaacttccgccaccaaatgtttcccgactataaagccacccgcccgccgatg
cccgacgaattgcgcccgcaggcggaaatgctgccggaaatggtgcgactgatgggctgg
ccggtgttggtggtgcccgatgtggaggcggacgacgtaatcggcacgctcgccaaacag
ggcgaagcggcgggctggaacgtggtggtgtccaccggcgacaaagacatggcgcaattg
gtgagcgaacacgtaaccctcgtgaacaccatgagcaacgaaaagcttgatattgaaggc
gtgaaagccaaattcggcgtgcgccccgaccaaatcatcgactaccttgcgctgatgggc
gacaaagtggacaacgtgcccggtgtggaaaaatgcggcccgaaaaccgcggtgaaatgg
ctggaacaatacggcaccttgcagggggtgatggaacacgcgggcgaaatcaaaggcaag
gtgggcgaaaacctgcaagccgcactggagcaactacccttgtcttatcaactggttacc
atcaaaaccgatgttgatttgcatacagaactttcagacggcctcgaaagcctgcgccgc
agcacgccgaaatggtcgcaactggcggtggaattcaaacggctgaatttccgcacttgg
ctgaaagaagccgaagagcgcataaatgaaggcaacggcgatttgttcggcgccgcgcat
atcggcgaacaggccgcgctggccgccgaacaaagcctgtctgaaaatgtttcagacggc
ctgccgcaaaccgcccccgcgcccgccgtattgaactaccaagcggttaccaccgaagcg
aagttttccgccctgctggacagattatcccaagccgaagccatcggcatcgacaccgaa
accacctcgctcaacccgatggaagcgcggctggtgggcatcagcatggcttttgccgcg
ggcgacgccgtatatatcccgctcggccacacccccaccgccgcgcccgaacagcttgat
ttaaacgaggtattaggccgtctgaaaccgcatttggagaatgcggaactcaaaaaaatc
ggccaaaacctcaaatacgaccaacacattttcgccaattatgatattgccttaaacggc
attgccggcgacgccatgctcgcctcgtatattctcgaaagccacttggggcacgggctg
gacgaattggccgaacgctggctcggcctgccaaccatcacctacgaatctctgtgcggc
aaaggtgccaaacaaatcagctttgccgacgtggcgctggagcaggccaccgaatatgcc
gcgcaagacgccgatttcgccctgcgcatcgaaagctggctcaaagcgcgcatggatgcc
aaacagctggaaatgtatcaaaacatggagctgcccgtggcccaagtgctgtttgaaatg
gaacgcaacggtgtattaatcgacaaaaacgaactcgcccgccaaagccacgagctgggc
agcgaactgttgcagctcgagcagcaggcctaccaaatcgccggccagcccttcaacctc
aactcgcccaaacaattgcaagaaatcctgttcgacaaaatgggcattcccaccaaaggc
ctgaaaaaaaccgcctccggcggcgtgtccaccaacgaagccgtgctcgaacagctcgcg
cccgactatccgctgcccaacatcattctgcaaaaccgcagcctggccaagctcaagtcc
acctacaccgacaagctgcccgaaatgattaacgcacgcaccggccgcgtacacaccacc
tacgcgcaggccgtggccatcaccggccgcttggccagcagcaaccccaacctgcaaaac
atccccatccgcacgcccgaaggccgcaaagtgcgccgcgcctttaccgcaccttcaggc
agcctcatcgtatcggccgactattcgcaaatcgaattgcggattatggcgcacttgagc
ggcgacaaaaccctgctcgaagcgtttaaaaacggcgaagacgtacaccgccgcaccgcc
gccgaagtgttcggcgtgccgcccgaaaacgtgaatgccgaccagcgccgctacgccaaa
accatcaacttcggcctgatttacggcatgggccaatacggcttggccaaatcgctgggc
atcgacaacgtgtcagcgaaaaacttcatcgaccgctacttcgcccgctaccccggcgtg
gccgactacatgcagcgcaccaaagaacaagccgccgcgcagggctatgtggaaaccctg
ttcggccgccgcctctacctgcccgacatccacagcaaaaacggcaacgcccgcgccggt
gccgaacgcgccgccatcaacgcgcccatgcagggcacggcctcggatttaatcaaacgc
gccatgatcgccgtgcgcaattggttaatttcagacggcctgcaaagcaagctggtcatg
caggtgcacgatgaattggtgttggaagtggccgaaagcgaattggatttggtgaaacag
aaactgcccgagattatggccggcgtggccgaaggacagctggatgtgccgctggtggcc
gaagtggggcaaggggagaattgggaagccgctcactaa
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