Nonlabens dokdonensis: DDD_0263
Help
Entry
DDD_0263 CDS
T02441
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo03420
Nucleotide excision repair
ndo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DDD_0263
03430 Mismatch repair
DDD_0263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndo03400
]
DDD_0263
Enzymes [BR:
ndo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDD_0263
DNA repair and recombination proteins [BR:
ndo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DDD_0263
MMR (mismatch excision repair)
Other MMR factors
DDD_0263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
ResIII
nSTAND3
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGC75390
UniProt:
L7W1P0
LinkDB
All DBs
Position
complement(303119..305446)
Genome browser
AA seq
775 aa
AA seq
DB search
MQDYISQLNDAQKEPVLQKEGPMIVIAGAGSGKTRVLTLRIAYLMQQGVDPFNILSLTFT
NKAAREMKKRIGDIVGASQAKNLWMGTFHSVFARLLRVEADKLGYPSNFTIYDSQDSQRL
TSAIIKEMGLDKDVYKYKQIFSRISSLKNSLITVRAYYNDPELREADEMARRPRFGEIYK
EYVERCFKAGAMDFDDLLLKTNELLNRFPDVLAKYQNRFQYILVDEYQDTNHSQYLIVKA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQRDYDDVKAYRLEQNYRSTKNIVEAANS
IIEHNKTKLDKVVWTANDDGPKIIVHRLMSDAEEGRYVASSIFENKMQHQLGNDQFAILY
RTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEVKDVLSYLRLIVNPKDEEALKRVINYP
ARGIGATTMDRLIVAAKQYDRSIFEVIENIDRVEIQINSSTKTKLKNFVTMIKSFQALEE
TQNVFELTEYVLKKSALITELKKDGTQEGISRIENIEELLNGMRDFVEGQKEVADARGAL
SEFLEDVALATDLDNDKGDDDRVSLMTIHLSKGLEFPYLYIVGMEEDLFPSGMAMNTRED
LEEERRLFYVALTRAEHQAYLTYTLSRYRWGKLVDAEPSRFITEIDDQYLEYTTPPDNYR
YKPLLDSDLWDEPDKSKLRQSKPKNGTPPSVNQPNPEQIRKLRKMKPVSSTSQSSKPAGF
EGKLKPGMTVEHARFGRGTVVNLEGIGGEKKAEINFQVGGLKKLLLRFAKLDVVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagattatatttctcaacttaacgacgcccaaaaagaaccagttttacagaaggaa
ggaccgatgatagtcattgctggagctggatctggaaagacgcgtgtacttacattacgc
atcgcttacttgatgcagcaaggtgtagatccttttaatatcctatcgctcacttttacc
aataaggcggcgcgagagatgaaaaaacgtatcggtgacattgtaggtgcgagccaggca
aaaaacctatggatgggaacttttcactcggtttttgctcgtttattgcgtgttgaggca
gataaattaggatatccgtctaattttacgatttacgattcgcaagactctcaaaggctt
accagcgctatcattaaagaaatgggactggataaagatgtgtataaatacaaacagatt
ttttccaggatctcttctcttaaaaacagtttgatcacagtaagagcttattataatgat
ccagaattgagagaggcagacgaaatggcgcgcagacctcgttttggcgagatttataaa
gaatatgtagagcgctgttttaaagctggcgcgatggattttgatgatttattgcttaag
actaacgagctgctcaaccgttttcctgatgtactggccaaatatcaaaatagatttcaa
tacatcttagtagatgagtatcaggataccaaccattctcagtatttgattgtaaaagcg
ctgtcagataaatttcaaaatatttgtgtggtaggtgatgatgcacaatctatttatgct
tttagaggagcaaatatcaataacattttgaacttccagcgggattatgatgatgtaaaa
gcttaccgactggagcaaaattaccgctctactaaaaatattgtagaagcggcaaactct
attatcgagcacaataaaacaaagcttgataaagtggtttggacagcaaatgatgacggt
cctaaaatcatcgtgcaccgactaatgagtgatgccgaagaaggtcgttatgtcgccagt
tccatttttgagaacaaaatgcagcaccagctaggcaatgatcagtttgcgattctttat
agaacaaatgcgcaatccagagctatggaagatgcactgcgtaaaaaagatattccttac
cgcatttatggtggattgagtttctaccagcgtaaagaagtaaaagacgtgctttcctat
cttagactaattgtaaatcctaaggatgaagaagctcttaaaagagtcatcaattatccg
gctcgtggaataggtgcaacgaccatggaccgattgatcgtagcggcaaaacaatacgac
agatcaatttttgaagtcattgaaaatatcgatcgagtagaaatccaaattaatagttct
acaaaaacaaagctgaaaaactttgttaccatgatcaagagttttcaagcgctagaagaa
actcaaaatgtctttgaactcaccgagtacgttttaaagaaaagtgctttaattacagaa
cttaaaaaagacggtactcaagaagggatttctcgtattgaaaatattgaagaattactt
aacggtatgcgagattttgtagaaggtcaaaaagaagtggccgatgctcgcggtgcacta
tcagaatttttagaagacgtcgcccttgcaacagatcttgataatgataaaggagacgat
gatcgtgtttccttaatgactattcacctgtctaaagggcttgaattcccatacttatac
atagttggtatggaagaagatctttttcctagtggtatggcaatgaatactcgagaagat
cttgaagaagagagacgtttattttatgtagcactcacaagagctgagcatcaagcttat
cttacctacactttaagtcgttaccgatggggaaaactagtcgatgcagaaccgagtcgt
tttatcacagagatagacgatcaatacctagagtatactacgccaccagataattaccga
tataaaccattgctagatagcgatctttgggatgaaccagataagtctaaactgcgccag
agcaaacctaaaaacggtacgccacctagtgtgaaccaacctaatccagagcaaataaga
aaactgcgtaaaatgaaaccagtgagcagtacttcacaaagcagtaaacctgctggattt
gaaggaaagctgaagccaggaatgactgtggagcatgcgcgttttggtcgtggaactgtc
gttaaccttgaaggaataggcggcgagaaaaaagccgaaatcaattttcaagtaggtgga
ttaaaaaagttgttgttgcgttttgcaaagctagatgtggtagagtaa
DBGET
integrated database retrieval system
