Nonlabens dokdonensis: DDD_0372
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Entry
DDD_0372 CDS
T02441
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ndo03009
]
DDD_0372
Enzymes [BR:
ndo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DDD_0372
Ribosome biogenesis [BR:
ndo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DDD_0372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
PrmA
FtsJ
UPF0020
TRAM
Methyltransf_11
Methyltransf_12
Methyltransf_32
Methyltransf_2
PCMT
RrnaAD
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AGC75499
UniProt:
L7W5W6
LinkDB
All DBs
Position
433603..435021
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AA seq
472 aa
AA seq
DB search
MSKRRRRAQKSFENVPVVDAGARGKSVAKTEEGEVIFLTDAVPGDVVNIQTFKKKRSFYE
GRVTKFIELSERRAAPVCKHFNTCGGCKWQHMTYESQLYFKQKEVVENLTRIGHLELPEI
TSIAGSSQQYHYRNKMEFSFSANRWLTLEEIQSDVEIEDKKALGFHIPGMWDKILHLDEC
HLHPQIGEDIRLSVHAFAKAENISYFNPREKSGTLRTLMLRMSSTGENMVVIQFFQDNEA
QRVALLDHLKESFPQITSLQYIINEKANDTIYDQDVICYHGRDHIFEEMEGLQFKINAKS
FYQTNSQQAYELYKITRDFAGLSGEELVYDLYTGTGTIAQFVAKKAKHVVGIEAIPVAIE
DAKTNAQHNGIDNTTFFAGDMKEVFTQEFIDEHGQPDVVITDPPRDGMHKDVVAQLLQLS
AKKIVYVSCNSATQARDLALLNEKYEITKVQPVDMFPQTHHVENVVLLELRK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgaagaagaagagctcaaaaatcctttgaaaacgtcccagtagtagacgct
ggagcaagaggtaaaagtgttgcaaaaactgaagaaggtgaagtcatattcctcactgat
gccgttcctggcgatgttgtaaatattcaaacttttaaaaagaaacgttccttttatgaa
ggtcgcgttactaaatttatagaattaagtgagcgacgtgcggcgccggtttgcaaacat
ttcaatacttgtggtggttgtaaatggcagcatatgacttatgaaagccagctgtatttt
aaacagaaagaagtggtcgagaatttgacacgtataggacatttggaacttccagaaatt
acttctattgcaggttcatcacaacaataccattatcgcaacaagatggaatttagcttc
agtgcaaacagatggttgactcttgaagagattcaaagtgatgtagaaattgaagataaa
aaagccttgggctttcacattccaggcatgtgggataaaattttgcacctagatgaatgc
catcttcatcctcaaataggagaagatattaggttgagtgtacacgctttcgcgaaagcg
gaaaacatatcttacttcaatccaagagagaaatctggaactttaagaaccttaatgtta
cgcatgtcttccaccggtgaaaacatggtcgtgattcaattctttcaagacaacgaagcg
caaagagttgccttattagatcatttaaaagaatcttttccacaaataacatcgttgcaa
tacattataaatgaaaaagcaaatgacaccatttatgatcaagatgtgatttgttaccat
ggtcgcgatcacatttttgaagaaatggaaggtttgcaatttaagatcaatgccaagtct
ttctatcaaaccaatagccagcaggcttatgagctgtacaaaatcacaagagattttgct
gggttaagcggtgaagaactggtttatgatttatacacaggtactggaacaattgctcaa
tttgtagcaaaaaaagccaagcatgtagtcggtatagaagccattcctgtagctattgaa
gacgccaaaacaaatgcacaacataatggtattgataacactaccttttttgcaggagat
atgaaagaggtatttactcaagaatttatcgacgagcacggccagcctgatgtggttatt
acagatccgccgcgagatggaatgcataaagatgtggtagcacaactgcttcaattgagt
gcaaaaaaaatcgtttatgtaagttgtaacagcgcaacacaagcacgtgatcttgcgtta
ttgaacgagaaatatgaaattactaaagtgcaaccggtagatatgtttccacaaactcat
catgtagaaaacgtagtattactggaattaagaaagtaa
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