Nonlabens dokdonensis: DDD_0866
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Entry
DDD_0866 CDS
T02441
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndo03032
]
DDD_0866 (topA)
03400 DNA repair and recombination proteins [BR:
ndo03400
]
DDD_0866 (topA)
Enzymes [BR:
ndo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DDD_0866 (topA)
DNA replication proteins [BR:
ndo03032
]
Prokaryotic type
DNA Topoisomerases
DDD_0866 (topA)
DNA repair and recombination proteins [BR:
ndo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DDD_0866 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AGC75993
UniProt:
L7WAR6
LinkDB
All DBs
Position
complement(906412..908937)
Genome browser
AA seq
841 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFKVESSFGHIADLPSKELGVDVDKDFAPKYVVSSDK
KDLVRKLKKLAAASDIVWLASDEDREGEAIAWHLAEQLDLKKEKTKRIVFNAITKSAVQH
AIDNPRTIDYDLVNAQQARRVLDRIVGYEISPILWRKVKGGASAGRVQSVAVRLIVERED
EILNFKSDNFFRIDADFNTGDGALLKAKLPSNLKSLKAAKEFLDKNKGAKFEVADLVKKP
AKKSPAPPFTTSTLQQEASRKLFFNVSRTMQLAQRLYEAGLITYMRTDSVNLSNEAKKGA
EEEIKKAYGNEFHKERNYKGKSKGAQEAHEAIRPTNFALHSSGADRDQVKLYELIWKRAI
ASQMSDAKLERTNVTIAADKHDKKFTASGEIVKFEGFLKVYLESTDDEDLEQQGLLPDLK
VGQNLLNKRILATERFTRPPYRYTEASLVKQLEELGIGRPSTYAPTITTIQNRKYIEKGQ
SEGEERNYVQLTLSKDKVSEKALTEKTGSNKNKMIPTDVGRVVNNFLVEHFGNVLDYNFT
AKVEESFDNIAEGKEEWTDMMNHFYKGFHPTVKDVAENAEREVGERVLGTHPESGKPISV
RLGRFGAMAQIGSVEDEEKPQFASLLPSQNLNTITLDEVMDLFKLPRTVGEYNGHPVEVA
QGRFGPYVKFNGKTFVSLEKDDDPMTLTFERAAELIQMKEKADAPIYMYDEQPVTKGVGR
FGPYIKWAGMFISVNKKYDFDNLSNDDIETLIKEKIQKEKDKLIVDWEEEGIRIEKARWG
RHNIIKGKTKVELSKDIDPLKITLEKAQELIAKKAPKKKAAAKKKAPAKKKTTAKKKTTK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatcttgtaatagtagagtcgcctgcaaaggcaaaaacaatagaaaaattt
ctaggaaaggattttaaagtagaatccagttttggtcatattgccgacttaccttctaaa
gaattaggagttgatgttgacaaagattttgctcctaaatatgtagtaagtagcgataag
aaagatttagttcgtaagcttaaaaaacttgctgcggcgtctgatattgtgtggctagca
agtgatgaggaccgtgaaggagaagctattgcatggcaccttgcagagcagctggattta
aagaaagaaaagaccaagcgtattgtttttaatgcaattacaaaaagtgctgtacagcat
gctatcgataatcctagaactatagattacgatcttgtaaatgcgcaacaagcaagacga
gttttagaccgtattgtaggatatgaaatttctcctattctatggcgtaaggtaaaaggc
ggtgcaagtgctggtcgagttcaatctgttgcagtgcgtttgatcgtggagcgagaagat
gaaatattaaacttcaagtcggataacttttttagaattgatgccgatttcaatacaggt
gatggggcgttactgaaagcaaaattacctagcaacctaaagtccttgaaggctgctaaa
gagtttttagataaaaataaaggagcaaaatttgaggtagctgacttggttaaaaagcca
gctaaaaaatctccagctccgccatttaccacatctactttacaacaagaagcatcacgc
aaattgttttttaacgtaagtcgtacgatgcaactcgcacaacgcctttatgaagcaggt
ttgattacttatatgagaacagattctgttaacttgagtaatgaagcaaaaaaaggtgct
gaagaagaaattaaaaaagcatacggtaacgagtttcataaggaacgcaactataaagga
aagtctaaaggcgctcaagaagcacatgaggcgatacgacctactaattttgctttacac
agctctggagcagatcgtgatcaggtaaaattatatgagttgatctggaagagagcgatt
gcaagtcaaatgagtgacgcaaagctggaaagaactaacgttactatcgctgcagacaag
catgataagaagtttacagcaagtggagaaatcgtaaagtttgaaggctttcttaaagtt
tatctagaaagtaccgacgacgaagatttagagcaacaaggtcttttaccagatcttaaa
gtaggacagaacttattaaacaaacgcattctagcaacagagcgttttacaagacctcct
tatagatatactgaagcttctctcgtaaagcaattagaagagctaggaataggtcgtcca
tctacttatgcacctactattactacaatccaaaatagaaaatacatagaaaaaggacag
tctgaaggtgaggaacgcaattacgtgcagctcactctaagtaaagataaagtctcagaa
aaggcgcttacagaaaaaacaggatctaataaaaacaaaatgattcctactgatgtaggt
cgagtggttaataatttcttagtagagcattttggaaatgtgttggactacaacttcact
gcaaaggtagaggagtcctttgacaatattgccgaaggaaaagaggagtggaccgacatg
atgaaccatttctacaaaggttttcatcctacagtaaaagacgtagccgaaaatgcagaa
cgtgaagtaggagaacgagttttaggaacacatccagagagcggcaagcctataagtgtg
aggttaggaagatttggtgccatggctcaaataggaagtgtagaagatgaagaaaaacca
cagtttgctagtttactgccttctcaaaatttaaatacaattactctcgatgaggtaatg
gatttatttaaattacctagaacagtaggagaatacaatggacatcctgttgaggttgct
caaggtcgattcgggccttatgtgaaattcaatggtaagacctttgttagcttagagaaa
gatgatgatcctatgacacttacttttgaacgagcagcagagcttattcaaatgaaagaa
aaagcagatgctcctatatacatgtatgatgagcagcccgttactaaaggtgttggtcgt
tttggtccttatatcaagtgggcaggaatgtttatttcagtaaataagaaatatgatttt
gataatttatcaaatgacgatattgaaacgctgataaaagaaaaaatccaaaaggagaaa
gataaacttatcgtggattgggaagaggaaggaatccgcatagaaaaggctcgttggggt
aggcataacattattaaaggtaaaacaaaagtagagttgtctaaagatatcgatcctttg
aaaataaccttagagaaagctcaagaacttatagctaagaaagcgcctaagaaaaaagca
gcggctaaaaagaaagctccagctaagaaaaaaacgacagccaaaaagaaaactacaaaa
aagtaa
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