Nonlabens dokdonensis: DDD_1098
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Entry
DDD_1098 CDS
T02441
Name
(GenBank) putative outer membrane protein, ompA family
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndo02000
]
DDD_1098
Transporters [BR:
ndo02000
]
Other transporters
Pores ion channels [TC:
1
]
DDD_1098
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
DUF748
SAM_4
Motif
Other DBs
NCBI-ProteinID:
AGC76226
UniProt:
L7W8T7
LinkDB
All DBs
Position
complement(1180211..1181578)
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AA seq
455 aa
AA seq
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MKNIFKLLVAGAILLSASTSYAQNESDRWSFAIGINAIDLYPVGEEDNGLGGYFDEFFNT
SHYNVLPAPSRFEVGYYVGDGIVATGAFSVNSIDTVGDTSITEISYYSFDGGLRYNLAEL
WNGEIVSPYLGVGGSYQILDNDGFGTFNGTLGLDVKIVDGIYANVQSTYKHAFEDAFPKH
FQHTVGVKFTWGAVDTDGDGIVDSKDECPTVAGLEQFNGCPDSDMDGIQDSKDDCPNVFG
PAETNGCPDSDGDSVLDKDDKCPQTAGLVALMGCPDADNDGVADADDKCPNEAGPASRQG
CPVKDRDNDGIEDAMDKCPDVAGIAELQGCPRPVVPTVEVQAQLNEYAKTILFDTNKDSI
QKESEEVLADIIAILKKYPEAKFEVDGHTDSDGPKQFNQRLSEARALSVKNYLVANGVNE
FRLSSKGFGETQPVASNKTRAGKAQNRRVEINLIK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatttttaaattattagttgctggagcaatcttactttctgccagcacgagt
tacgcacaaaatgaaagcgatcgctggagttttgcaataggtattaatgcaatcgatctt
tatccggtaggagaagaagataatggtctaggaggctatttcgatgaattttttaataca
agtcattacaacgtattaccagcaccttctagatttgaagtaggatactacgtaggcgat
ggtatcgttgcaactggtgcattttcggtaaactcaattgatactgtaggagatacaagt
attactgagatttcttactattcatttgacggtggattgagatataacctagctgagctt
tggaacggcgagattgtcagtccttatctaggtgtaggtggatcttaccaaattttagat
aatgatggatttggtacttttaatggtactttaggtttagatgttaaaatagtagatggt
atttacgcaaatgtacagtctacttacaagcatgcttttgaagatgcgtttcctaagcat
tttcaacacacagtaggagtgaagtttacttggggtgctgttgatactgacggagatggt
attgtagattcaaaagatgagtgtcctacagttgctggtttagagcaatttaatggatgt
ccagattctgacatggatggtattcaagactctaaagatgattgtccaaacgtatttggt
cctgctgaaactaatggatgtcctgattctgatggagatagtgtattagataaagacgat
aagtgcccacaaactgcaggtttagtagctcttatgggttgtcctgatgcggataacgat
ggtgttgctgatgctgatgataaatgtcctaatgaagcaggtcctgcttcaagacaaggt
tgtcctgtaaaagatagagataatgatggtatagaagatgctatggataagtgtccagat
gttgcaggtattgcagaattacaaggttgtcctagaccggtagttccaactgtagaggtg
caagcgcaattgaatgaatatgctaagactatcttatttgatacaaataaagattccatt
caaaaagaatctgaagaagttcttgctgacattattgcaatattaaagaaatacccagaa
gctaagtttgaggtagacggtcacacggatagtgatggacctaagcaattcaatcaaaga
ctttctgaagcacgcgcactttctgtaaaaaattacttagtagctaatggagttaacgaa
ttccgtttaagctctaaaggttttggagaaactcaaccagtagcttctaataaaactaga
gctggaaaagcgcaaaacagacgtgtagagatcaatcttatcaagtaa
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