Nonlabens dokdonensis: DDD_1325
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Entry
DDD_1325 CDS
T02441
Symbol
truB
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndo03016
]
DDD_1325 (truB)
Enzymes [BR:
ndo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DDD_1325 (truB)
Transfer RNA biogenesis [BR:
ndo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DDD_1325 (truB)
Prokaryotic type
DDD_1325 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Motif
Other DBs
NCBI-ProteinID:
AGC76452
UniProt:
L7W8B3
LinkDB
All DBs
Position
1431827..1432543
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AA seq
238 aa
AA seq
DB search
MNQSSLENPYLKGQVLLIDKPLEWSSFQVVNKLRWLIRKEYKIKKIKVGHAGTLDPLASG
LLIICTGKETKNITTYQAQEKEYTGTITLGATTPSYDLETEVDRTFPLDDLTEDLIRKTT
TQFTGEIQQKPPIFSAIKKDGKRLYELARAGETTEIKSRTVTIHDFEITRIELPEVDFKI
SCSKGTYIRSIAHDFGAALNNGGHLTALRRTAIGNYRVENAMSIKSFEELVKSDSKKV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaagtagcctagaaaacccatacctaaaaggacaagtacttctcatagataaa
ccactggaatggtcttccttccaagtcgtaaataaactgcgctggttgattagaaaagaa
tataaaataaaaaagattaaggtagggcatgcaggcactttagatcctttggcaagcggt
ttattaattatttgtaccggtaaggaaacaaaaaatattaccacctatcaagctcaagaa
aaagaatataccggaactataactctaggagcaacaacacctagttatgatctagaaaca
gaggtagatcgtactttcccgctagatgacttaacggaagatttgatacgtaaaacaact
acacagtttactggagaaatacagcaaaagccacctattttctcagcaattaaaaaagat
ggtaaaagactctatgagctagcaagagccggagaaactactgaaataaaatctcgcaca
gtcactattcatgattttgaaattacaaggatagaacttccagaagtagattttaagatc
tcgtgtagcaaaggaacttacataagatccattgcgcatgattttggtgctgcattgaac
aacggaggtcatttaaccgctttgagaagaactgcaatcggtaattatcgagtagaaaat
gcaatgagtattaaaagctttgaagagttagtaaaatcagactctaaaaaagtatag
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