Nonlabens dokdonensis: DDD_1430
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Entry
DDD_1430 CDS
T02441
Name
(GenBank) putative lytic murein transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ndo01011
]
DDD_1430
Enzymes [BR:
ndo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DDD_1430
Peptidoglycan biosynthesis and degradation proteins [BR:
ndo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DDD_1430
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM_RLK
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
AGC76557
UniProt:
L7W8K8
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Position
1532964..1534529
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AA seq
521 aa
AA seq
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MYKYLLFFLIPIYTLPTTAQVVEQDSIKTQGKVVTYEEYKKQQIQNDSLEAETILSVEIP
VQEIAVDTTISGTPLKIYPEVDDFDEKLLNELYNNDLYDYMYDEIVQMDYSETVNQTLPT
DTLKARLAIINETTPFQIDYNPILEKLINKKLSYQRVYMERLMTLSDYYFPMFEPYLDQY
DIPLEMKYLAVVESALDPRIKSRVGATGLWQFMFTTGRNYDLEVNSYVDERMDPIKSTQA
ACKFMRSLYNIYGDWDLVLAAYNSGPGNVNKAIRRSGGYKNYWNIRPYLPRETAGYVPAF
QAMMYLFKYAPEHGFQPQQTIYKSIATDTIRVKRTISLEHVAQFTDQDLEVVQFHNPSYK
LDIIPVVKGRNYSLRLPIRDAAKFVSNEDDVYAFAKAEFEKKEKPIPELLKAESRIVYRV
KSGDYLGKIANRYGVRVSQIKRWNSLRSNNLSIGQRLYIHSRNPITSSSSKSTKTPNTYK
VKSGDSLWKIANKYGISIASIRKLNPSKSQNLKAGTTLKLK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatacctcctatttttccttattcctatttacacactgcctactacagcacaa
gtggtcgagcaagattctataaaaacgcaaggtaaagtagtcacgtatgaagagtataaa
aaacagcaaattcaaaatgattctttagaagcagagaccatcctttctgtagaaattcct
gtgcaagaaatagcggtagatactacaatttcagggacacctttgaaaatatatcctgag
gtagatgattttgatgagaagttgcttaatgagttgtataataacgatttatatgattat
atgtacgatgagatcgtacaaatggattatagtgagacagtaaatcaaacgcttcctaca
gatacgctcaaggcaagacttgctattatcaatgagaccacaccttttcagattgattat
aaccctattttagagaagttgatcaataagaaattgagttatcagcgtgtttacatggaa
cgtttaatgacgcttagcgattattattttcccatgtttgagccttacctagatcaatat
gatattccactagaaatgaaatatctggcagttgtggaaagtgctctcgatcctcgtatc
aagagtagagtaggagcgacaggattgtggcaatttatgtttaccacaggtcgcaattat
gatcttgaggtcaattcttatgtagatgagcgcatggatcctataaaatctacacaagca
gcgtgtaaatttatgcgcagtttgtacaatatttatggagattgggatctggttcttgcg
gcttataattctggtccaggaaatgtaaataaagcgatacgacgcagtggtggctataaa
aactactggaatataagaccctatttacccagagaaacagctggttacgttccagcgttt
caagcgatgatgtatttatttaaatatgcgccagagcatggtttccagccgcaacaaacc
atttataaaagcattgcgacagataccattagggtaaaaagaactatttcgttagaacat
gtagcacaatttacagatcaagatctcgaggtcgtgcaatttcataatccgtcgtataaa
ctggatattattccagtggtaaaaggcagaaactacagtttgcgattgcccataagagat
gccgcaaaatttgtgagtaatgaggatgatgtgtacgctttcgcgaaagcggaatttgaa
aagaaagaaaaaccgataccagagctcctcaaagcagaaagcagaatcgtatatcgagtg
aaaagtggcgattacttaggtaaaatagccaatcgttatggcgtgcgcgtcagtcaaatc
aaacgctggaacagtctaagaagtaataatttaagcatcggtcagaggctgtatattcat
tcaagaaatccgattacgagctccagctcaaaatcgactaaaacacctaacacttacaaa
gtgaaaagcggtgacagcttgtggaaaatagccaataaatatggcatatctattgcaagc
atacgtaaattaaatccttctaaatcccaaaacttaaaagctgggacaactttaaaacta
aagtaa
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