Nonlabens dokdonensis: DDD_1466
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Entry
DDD_1466 CDS
T02441
Name
(GenBank) bacteriocin ABC transporter, ATP-binding/permease protein
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo02010
ABC transporters
ndo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DDD_1466
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDD_1466
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ndo01002
]
DDD_1466
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndo02000
]
DDD_1466
Peptidases and inhibitors [BR:
ndo01002
]
Cysteine peptidases
Family C39
DDD_1466
Transporters [BR:
ndo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
DDD_1466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
Peptidase_C39_2
AAA_21
TniB
AAA_16
AAA_22
nSTAND1
ABC_ATPase
nSTAND3
DUF87
AAA_29
AAA
AAA_23
AAA_18
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AGC76593
UniProt:
L7WCF5
LinkDB
All DBs
Position
1567092..1569266
Genome browser
AA seq
724 aa
AA seq
DB search
MSQLKTTSHKNIEKSLVLQHDQSDCGVACLLSLIQYYNGANSLEKLRELSGTTKQGTTLL
GLYQAANQLGFTAQGNEADIQALIVHGEPLILHVIIENRLQHYVICYGYDNGKFIIGDPA
NGVQSYSKEELEGIWKSKTCLTLTPNETFTVAKTQNKNKKQLLLQLLKDDYRLITFSVLL
GLGVATLGMAMAIFSQKLIDDILPSRDFNKLITGIVLVAFLLLIRVLFTALRSYFLIEQT
KDFNNRIIDSFYSSLLQLPKPFFDTRKIGELVARLNDTQRVQRVISQVIGNLVINALVTL
VSLGFLFYYSWQTGLIAFISLPFYFSLIYSFNKRIIKAQKEVMQGYAFSESNFITSMQGI
ATIKNNNRQDVFKKVNQLIYGNYQDKAFHLGKINVRLSVFSGVFSVLFLIGILVYTCVQV
YDESMQLGELMAILGVAGSLLPSVASLALITIPINEAKVAFNRMYEFASMEKECSGEISL
THFNKLEVKNLSFRFAGRSPLLENINFQVLSNECLAIVGESGSGKSTLGQIIQKFYLYEN
GTVLINDNQSLNEISTREWRSMLGVVPQEITIFTGNIIDNLLLGQSDTSENIEDFVNTYG
FESFIQSLPQQYATILGEKGINLSGGQRQVIGLMRALYKRPKVLLLDEFTSAMDRKTEQM
VLQLLNRLKNEMSIIIISHRLHSLPKIADRIYVLENGTITNSGNHQKLMLTKNFYSDFWS
ELEL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaactaaaaactacttctcacaagaatatagaaaaatcactagtattacagcat
gatcagtcagattgtggtgtggcttgtttactatcactaatccaatattataacggtgct
aactcattagaaaaattacgagagttaagtggtacgaccaaacaaggaacaaccttactg
ggtttatatcaagcagcaaatcaattaggttttacggcacaaggtaacgaggcagatatt
caagcacttatagttcatggcgagccacttatattgcacgtaatcattgaaaataggttg
cagcattatgtgatatgctacggctatgataatggtaaatttattataggtgatccagca
aacggtgttcaaagctatagtaaagaagaattagagggtatctggaaatcaaaaacctgt
ctcaccttaacacctaatgaaacttttaccgttgctaaaacccaaaataaaaacaaaaag
caattgttattacaactgcttaaagatgattacaggttaattacctttagtgttttactc
ggattaggtgttgctaccctaggaatggcgatggcaattttctctcaaaagttaatagat
gatatattgccatctagagattttaataagttgattactgggatcgtgttggttgctttc
ttactcttaataagagtgctattcactgcattgcgcagttactttttaatagaacaaacc
aaagatttcaataatagaattattgatagcttttactcttcattactacaattgcctaaa
cccttttttgacactcgtaagataggtgagttagtggctcgacttaacgatacacaacga
gtacagcgtgtaatatcacaggtaatcggaaatttggttatcaatgcattagtaactcta
gtttctttaggctttttgttttattattcatggcaaacaggattgattgcttttataagt
cttcctttttatttctcgttaatttacagtttcaacaaacgtattatcaaggcgcaaaaa
gaagtaatgcaaggttatgctttcagcgaaagcaatttcataacctctatgcaaggtatt
gctactattaaaaacaacaacaggcaagatgtttttaaaaaggtaaaccaattgatttat
ggtaattaccaagataaagcctttcatctaggtaaaattaatgtaagattatctgtgttt
tctggcgttttcagcgtactatttttgataggtatattggtttatacctgtgttcaggtg
tatgatgaaagcatgcaattaggtgagttaatggcaattctaggagttgcaggtagttta
ttgccatctgtagctagtcttgcattgattacgattcccataaatgaggcaaaagtagcc
tttaatagaatgtacgaatttgcatctatggagaaagagtgtagtggtgaaatttctctt
acacacttcaataaattagaagttaaaaatctttcttttcgattcgcaggtagaagtccg
ctactagaaaatattaactttcaggtattgtcaaatgaatgcctcgctattgtaggagaa
agtggaagtggtaaaagtacattaggtcaaatcattcagaaattttatctctatgaaaat
ggaactgttttaattaatgataaccagtctttaaacgagatttcaactcgtgaatggcgt
tctatgttaggcgttgtaccacaagaaatcacgatttttacaggaaatattattgataat
ttgttacttggtcagtcggatacttcagagaatattgaagattttgtaaacacttacggt
tttgagtcatttattcaatccttaccacagcaatatgcaacgattttaggtgaaaaaggc
attaacctttctggcggacagcgtcaggtaataggtttaatgcgcgccttgtataaacga
cctaaggtattattgctagatgagtttacctctgctatggacagaaaaacagagcaaatg
gtacttcaattattgaatcgcttgaaaaatgaaatgagtatcattataatttcacaccgt
ttacattctttaccaaaaatagccgatcgcatatatgttttggaaaatggaacaataacg
aattctggaaaccaccaaaaacttatgctaacaaagaatttttatagtgacttctggtct
gaattagaactttga
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