Nonlabens dokdonensis: DDD_1733
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Entry
DDD_1733 CDS
T02441
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo03030
DNA replication
ndo03410
Base excision repair
ndo03420
Nucleotide excision repair
ndo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDD_1733 (polA)
03410 Base excision repair
DDD_1733 (polA)
03420 Nucleotide excision repair
DDD_1733 (polA)
03440 Homologous recombination
DDD_1733 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndo03032
]
DDD_1733 (polA)
03400 DNA repair and recombination proteins [BR:
ndo03400
]
DDD_1733 (polA)
Enzymes [BR:
ndo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DDD_1733 (polA)
DNA replication proteins [BR:
ndo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DDD_1733 (polA)
DNA repair and recombination proteins [BR:
ndo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DDD_1733 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DDD_1733 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGC76860
UniProt:
L7W5E4
LinkDB
All DBs
Position
complement(1850955..1853792)
Genome browser
AA seq
945 aa
AA seq
DB search
MTNDGTDDKRLFLLDAYALIFRGYYALIKNPRINSAGMDTSAIMGFTNSLFDVIRREKPE
YLAVAFDKEGSKERVEMYADYKANRDETPEAIKIAVPYIQKILKAMHIPIVEEAGIEADD
LIGTLAKQAEKEGFTTYMVTPDKDYAQLVSENIFMYKPARMGNGIEIWGIPEVQKKFEVE
RPEQVIDYLGMMGDASDNIPGLPGVGDKTAKKFIAAYGSMEGLLENTDKLKGKMKEKVIA
NAELGLLSKKLATIRLDCPVTFKAEKYTLDDPNVEAVHEIFDELEFRRAKETMAKIFSKD
VSSSAAENASSSNSNADAGAGQFSLFDAPGSGTAAEASTTGRQTLATSDHLYQLVQEGMG
TKLFLQSLMQQSSVCFDTETTGLDPLTAELVGIAFSWEKGKGFYLPIPEDRDAAQDVVNE
LKPFFESETIEKVGQNLKYDIKVLDKYGVNVKGPMFDTMLAHYLINPDMRHNMDVLAETY
LNYTPQSIVELIGKKGKNQKSMRDVELEKQKEYAVEDADITFQLKEKFVPELASAGTDKL
FHDIEMPLLDVLAAMEIEGVNLDGDFLSSLSRKLNEDIERLEKDIYEAAGEEFNIGSPKQ
LGEILFGKMKLVDKPKKTKTGQYSTAEDVLSYLAKDHQIIADVLEYRGLAKLKSTYVDAL
PNQVNPATHRIHTNYMQTVAATGRLSSTDPNLQNIPIRTERGRQVRKAFVPRDENYTLVA
ADYSQIELRIIAALSEEENMIAAFQGGEDIHASTAAKVFNVAIEDVTREQRSNAKTVNFG
IIYGVSAFGLSNQTDLDRSEAKELIDTYYATYPKLKAYMQEQVDFARENGYVETVLGRRR
YLKNINSSNAVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKFEKMQCQSKMLLQVHDE
LVFDIHNDELEDMKKLIQDEMQNAYKMTVPLDVEVGVGENWLEAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgacggtactgacgataaaagattatttctccttgatgcttatgccttgatt
tttagaggttattatgcattgatcaaaaaccctagaattaatagcgccggcatggatacc
agtgcgattatgggttttactaattcgctatttgacgtgataagacgtgagaaaccagaa
tatctagccgttgcatttgataaagaaggaagcaaagaacgtgtagaaatgtatgccgat
tataaggcaaatcgtgatgagactcctgaagcgataaaaattgcagtaccgtatattcag
aaaatcctaaaagcgatgcatattcctatcgtagaagaggcaggaattgaggcagatgac
ttgataggaacgctggcaaaacaggcagaaaaagaaggttttaccacttatatggtaaca
ccagataaagattatgcgcagttagtgtcagagaatatctttatgtataaacctgctcgt
atgggtaacggaatcgagatctggggaattcctgaggtgcaaaagaaatttgaagtagaa
cgacctgagcaagttatcgattacctgggaatgatgggtgatgccagtgataatattcct
ggactgcctggtgtaggagataaaaccgctaagaaatttatagccgcttatggatcgatg
gaaggtttattagaaaacactgataagcttaaaggtaaaatgaaagaaaaggtcatcgca
aatgccgaattaggtcttctttctaagaaactagctactattagactggactgcccagtg
acttttaaagcagaaaaatacaccttagacgatccaaatgtcgaggctgtacatgaaatt
tttgacgagctagaattccgtcgtgctaaagaaaccatggcaaagattttttctaaggat
gtcagttcgagcgcagccgagaacgcttcaagttccaattcaaatgctgatgccggcgca
ggacagttttctttatttgacgctccaggatctggaacagcagccgaggcttcgactaca
ggaagacaaacccttgcaactagcgaccatttataccaactcgttcaagaaggaatggga
acaaagctgtttttacaatcgttgatgcagcaatccagcgtttgttttgatacagaaact
actggacttgatccactaacagcagagctagtaggaatcgcattctcttgggaaaaagga
aaaggtttttatctgcctattcctgaagatcgtgatgctgctcaagatgtggttaacgaa
cttaaaccgttttttgaaagtgaaaccattgagaaagtaggacaaaatctcaaatacgac
atcaaagtactggataaatatggagtaaatgtaaaaggaccgatgtttgacaccatgctg
gcacattacctcatcaatccagacatgcgtcacaatatggacgtactagccgaaacctat
ctgaactacacgcctcaatctattgtcgagttaatcggtaagaaaggtaagaatcagaaa
tcgatgcgcgatgtagagctagaaaagcaaaaggaatatgccgttgaagatgctgatatt
acttttcagctcaaagagaaatttgttccagagcttgctagcgcaggaactgataagtta
tttcacgatatagaaatgccattgcttgatgtgctggctgcgatggaaatagaaggtgtt
aatctagatggtgattttttaagttcgctttcgcgaaagctgaacgaagacatagaacgt
ctagaaaaagatatttatgaagcggcaggagaagaatttaatataggctcgccgaagcaa
ttgggagaaatattgtttggtaaaatgaagcttgttgacaagcctaaaaagacaaaaacg
ggacaatattctactgccgaagatgtactgagttatctcgccaaagaccatcaaattatt
gctgatgtactggaataccgtggtcttgccaaattaaaatcaacttatgtggacgcattg
cctaatcaggtcaatcctgctacgcatcgcatccataccaattatatgcaaacggttgca
gcaacaggtagattgagttctacagatcctaatttgcaaaatattcctatacgtaccgag
cgtggtcgtcaagtgcgcaaagcatttgtaccaagagatgaaaactatacactcgtcgct
gcagattattctcagattgaattgcgtattatcgctgctttaagcgaagaagaaaacatg
atcgctgcctttcaaggtggtgaagatattcacgcatcgaccgctgcaaaagtattcaac
gtcgctatagaagatgtcactagagaacagcgtagcaatgcaaaaactgtgaattttgga
atcatttatggggtaagcgcattcggattaagtaatcaaaccgatctagatcgtagcgag
gctaaagaattgatagacacttactatgctacttatcctaagttgaaagcatatatgcaa
gaacaagtagattttgctcgagaaaacggttatgtagaaaccgttttgggacgacgtcgt
tatttaaagaatattaatagttctaatgccgttgtgcgaggcgcagccgaacgcaacgcg
gtgaatgctcctattcaaggaagtgcggcagacattattaaaatcgcgatgatcaatatt
cacaaaaagtttgaaaagatgcagtgtcaatctaaaatgttactgcaagtacatgatgaa
ttggtttttgacattcataacgacgagttagaagacatgaaaaaactcatacaagacgag
atgcaaaatgcttataaaatgacggtgccactagatgtggaagttggtgttggtgagaat
tggttagaggcgcattaa
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