Nonlabens dokdonensis: DDD_1827
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Entry
DDD_1827 CDS
T02441
Symbol
truA2
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndo03016
]
DDD_1827 (truA2)
Enzymes [BR:
ndo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DDD_1827 (truA2)
Transfer RNA biogenesis [BR:
ndo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DDD_1827 (truA2)
Prokaryotic type
DDD_1827 (truA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AGC76954
UniProt:
L7WA03
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All DBs
Position
complement(1958542..1959348)
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AA seq
268 aa
AA seq
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MNPGPFAQNNRQFFLIKLQYLGFRFHGWQKQPNNIPTVERMVLRTLRYVFDHSNFKVLAA
GRTDAKVSVNETWIELFLDDSKELEPDSFLADFNQNLPSDIRALEIEKTGKDFNVIQAPK
IKEYIYLFSHGEKFHPFCASMMVYMKSELDIEIMQTAARLFEGTHDFWSYTYKPSETTET
TSTIESCYIEKNELFTANFFPEESFVFRVTGAGFKRHQVRLMMGMLIDLGMHKLTLEEFV
ETLDGSKKIHLSHIAPSSGLMLYKSEFL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaggaccttttgctcaaaataaccgtcagtttttcctgatcaagctgcaatac
ctaggttttagatttcatggctggcaaaaacaacccaacaacatcccaacagtagaacgt
atggtattgagaaccttgcgttatgtttttgatcattctaattttaaagttcttgccgct
ggaagaacagatgcaaaagtatcggtaaatgaaacttggattgaattattcctagacgat
tctaaagagttagaaccagattcattcctagccgactttaatcagaatttacctagcgac
attagagcgttagaaattgagaagacaggcaaagattttaatgtcattcaagctcctaaa
attaaggaatacatttatcttttttcgcatggagaaaagttccatccgttttgtgcatct
atgatggtatatatgaaaagtgagctggatatagaaatcatgcaaacggcagctcgatta
tttgaaggaacacatgacttctggtcgtatacttataaaccttctgaaaccacagaaact
acctcaactattgaaagctgttacattgaaaagaatgagctttttaccgcaaactttttc
ccagaagaaagttttgttttcagagtgacaggagcaggatttaagcgtcatcaagtacgc
cttatgatgggaatgttgattgatttaggaatgcacaaacttactttagaagagtttgta
gagacattagatggtagcaaaaaaatacatctttctcatatcgcaccatctagtggtttg
atgctttacaaaagtgagtttttgtaa
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