Nonlabens dokdonensis: DDD_1960
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Entry
DDD_1960 CDS
T02441
Name
(GenBank) ribosomal large subunit pseudouridine synthase F
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ndo03009
]
DDD_1960
Enzymes [BR:
ndo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DDD_1960
Ribosome biogenesis [BR:
ndo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DDD_1960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AGC77087
UniProt:
L7WA45
LinkDB
All DBs
Position
complement(2117359..2118321)
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AA seq
320 aa
AA seq
DB search
MNRGSEGSKNKGKGRRNGKSAAPNKSSNDRKGKSFPKSNDSDDRKTTRGGKNQVVGTSRS
GKPVTKKEYIERKKAESFSKRKTDKAGTRLNKYIANSGLCSRRDADIYIKAGSVSVNGKP
VTEMGYQVMPGDEVRFDDRPIQPTKKEYFILNKPKGFNSPRKGERSSKTVLDLMENASPN
SLHFVGRLGRASLGLMLFTNDLEMANKLNNPKQPLRKIYQVALDRSFKHEHLMQLRKGIL
IDKEVIEIKDINYIENGKNNEIGIEIFSGKDNIVQNLFEAVGYEVKVLDRVVLGGLTKKD
LPRGHYRKLTEQEVINLKMI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaggtagcgaaggatcaaaaaataaaggtaaaggccgccgcaatggtaaaagt
gccgcgcctaataaaagtagtaatgatcgtaaaggaaagtcatttcctaaaagtaacgat
agcgatgatcgcaaaaccactcgtggaggaaaaaatcaagtggtaggtacatctcgttct
ggaaaaccagtaacaaagaaagaatacattgagcgcaagaaagcagaaagcttcagtaaa
agaaaaacggacaaagcaggaactaggcttaataaatacatagctaactctggattgtgc
agtcgtcgcgatgcagatatttatattaaagcaggaagtgtttctgtaaatggtaaacct
gttacagaaatgggatatcaagtaatgcctggtgatgaagtaagatttgacgatcgccct
atacagcctacaaagaaagaatatttcatacttaataagcccaaaggttttaactcgcct
cgcaaaggggaacgttcttcaaaaaccgttctagaccttatggaaaatgcaagtcctaac
agtttacattttgtaggtagattaggaagagcgtctttaggacttatgctttttactaat
gatcttgaaatggcaaataaactgaataatcctaagcaacctttgcgtaagatttatcaa
gttgccctagatcgcagttttaaacatgaacatttgatgcaattgcgtaagggaatcctt
atcgataaagaagtaattgagatcaaagatatcaactacatagaaaacggtaaaaacaac
gagataggaattgaaatttttagtggaaaagacaacatcgttcaaaatttatttgaagcg
gtaggctatgaagtaaaagtgctagatagagttgttttaggaggtcttactaaaaaggat
ttaccacgtggacattaccgcaaattaactgaacaagaggtcattaacctcaaaatgata
taa
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