Nonlabens dokdonensis: DDD_2244
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Entry
DDD_2244 CDS
T02441
Name
(GenBank) putative DNA topoisomerase I, eukaryotic-like protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndo03032
]
DDD_2244
03400 DNA repair and recombination proteins [BR:
ndo03400
]
DDD_2244
Enzymes [BR:
ndo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DDD_2244
DNA replication proteins [BR:
ndo03032
]
Prokaryotic type
DNA Topoisomerases
DDD_2244
DNA repair and recombination proteins [BR:
ndo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DDD_2244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AGC77371
UniProt:
L7WBV1
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All DBs
Position
complement(2450009..2451103)
Genome browser
AA seq
364 aa
AA seq
DB search
MTLTAQQIEECLTEPEAAAHLADLVYIQDQHLSIHRKKYGRGFTYLIDNKTRLSDKNQLK
RIKSLVIPPAWEKVRISKIPNGHLQVVGRDEKGRKVYLYHDIWSLLRNQTKFFKMSAFAK
ALPKIRKRLHQDLDQDRMTKEKCLALVLSIMDETYIRVGNQYYADKNKTYGLSTLRMKHV
DDSNNKIQFSFTGKKGVSQNTTIDDPELVELIQECEGIPGWELFQYLDEKGDHHSIDSTM
INEYMHEIAGDIFSAKDFRTWGATREFFLKMVELPEPKTAKEREKNILQGYDTAAEALGN
TRSVCKQYYVHPQLPNVYAEDQFAPYRESYKNYTDTDLFAASEKCVQEIIDQFEIEFATD
TNVS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgactctaactgctcaacaaattgaagaatgtctgactgaaccagaagcagcagcacat
ctagcagatcttgtatatattcaagatcaacatctatccatacaccgcaaaaaatacgga
agaggttttacttatctaatagataataaaacaaggttaagtgataaaaatcaattaaaa
cgcatcaagtctttggtgattcctccagcatgggaaaaagtaaggataagtaaaatccct
aatggacaccttcaggtagtaggccgcgatgaaaaaggaagaaaagtctatttatatcat
gacatttggtcgctactgcgcaatcaaactaagttttttaaaatgtccgctttcgcgaaa
gcgttacctaaaattagaaaaagactgcatcaagatcttgatcaagatcgaatgaccaaa
gaaaaatgtctggctttagttttatccatcatggatgaaacctacataagagtaggaaat
caatattatgcagacaagaacaaaacttacggactctccaccttaagaatgaagcatgta
gacgatagtaacaataaaatccaattctcatttaccggtaagaaaggtgtgtctcaaaat
acaactatagacgatcctgagttagtagaattaattcaagaatgtgaagggattccagga
tgggaattatttcaatatcttgacgagaaaggagatcatcattctatagatagcacgatg
attaacgagtacatgcatgagatcgcaggagatattttcagcgcaaaggattttagaaca
tggggcgcaactagagaatttttcttaaaaatggttgaacttcctgaaccgaaaactgct
aaagaaagagaaaagaatattttacaaggttacgatactgccgccgaagctttaggaaat
acaaggtctgtctgtaaacagtattatgtgcatcctcaactacctaatgtctatgcagaa
gaccaatttgcaccctatagagaaagttacaaaaactacacagacaccgacttatttgcg
gcatctgaaaaatgtgttcaagaaattattgatcagtttgagattgaatttgccacagat
acaaatgtttcttaa
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