Nonlabens dokdonensis: DDD_2259
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Entry
DDD_2259 CDS
T02441
Name
(GenBank) MiaB family tRNA modifying enzyme
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ndo03009
]
DDD_2259
Enzymes [BR:
ndo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DDD_2259
Ribosome biogenesis [BR:
ndo03009
]
Prokaryotic type
ribosomal protein modification factors
DDD_2259
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AGC77386
UniProt:
L7WBW2
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All DBs
Position
2462761..2464068
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AA seq
435 aa
AA seq
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MRTKTRKKNKINVITLGCSKNVYDSEVLMGQLKASGKDVVHEEEGNIVVINTCGFIDNAK
EESVNTILDFVERKQNGEVDQVFVSGCLSERYKPDLQKEIPDVDQYFGTTELPSLLKALG
ADYKHELIGERVTTTPKNYAYFKIAEGCDRPCSFCAIPLMRGGHKSTPIEHLVIEAEKLA
ANGVKELILIAQDLTYYGLDLYKERRLAELLRELAKVEGIEWIRMHYAFPTGFPLDVLDV
MKSEPKVCNYLDIPLQHISTPVLKSMRRGTTFEKTNALLEKFRTLVPEMAIRTTLIVGYP
GETEEDFEILKQWVKDQRFERMGCFTYSHEENTHAYKLEDDVPAEVKQERANEIMEIQSQ
ISWELNQQKIGQEFRVMIDRKRGNHFVGRTEFDSPDVDNEVLINAEQHYLSVGSFVNVKI
TEAEDFDLFAVPVEE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaaaacgagaaaaaagaataagatcaacgtaataactttaggttgttctaag
aatgtgtacgatagcgaggtgctgatgggccagttgaaggctagtggtaaggatgttgtg
catgaggaagaaggtaatatcgtggtgatcaacacttgcggttttatcgataacgcaaag
gaagaatctgtgaatacgattcttgattttgtagaacgtaagcaaaatggtgaggtagat
caggtgtttgtttcaggttgtttatctgaacgatacaagccagatcttcaaaaagaaatt
ccagatgtagaccagtattttggtacgacagaattaccatcacttttaaaagctctaggt
gccgattataagcacgagctgataggtgaacgagtaacgactacacctaagaactatgcg
tattttaaaattgccgaaggttgtgatagaccttgttctttttgcgcgatccctttaatg
cgtggtggacataaaagcacacctattgaacatttagtcatagaagctgaaaagcttgct
gcaaatggtgtcaaagaattgattcttatcgcacaagacttgacttattacggtcttgat
ttatataaagaaagaagactagctgagttattgcgcgagctggcaaaagtagaaggaatc
gaatggatcagaatgcattatgcgttcccaacaggtttcccgttagatgttctcgatgta
atgaagagcgagcctaaggtgtgtaattatctagatattccattgcagcatatatctaca
ccagttttgaagtctatgcgtcgtggtactacatttgaaaaaaccaacgctcttctagaa
aaattcagaacacttgttcctgaaatggcgatacgtacgactctaatcgtaggttatcca
ggagaaacagaagaagattttgaaatcttaaagcaatgggtaaaagaccagcgttttgag
cgaatgggatgttttacgtattcgcatgaagaaaatactcatgcttacaagctagaagat
gatgttcctgctgaggtaaagcaagaacgtgctaatgagatcatggaaattcaatcgcaa
atttcttgggaattgaaccagcagaagataggtcaagagtttagagtgatgattgatcgc
aaacgtggtaaccattttgtaggtcgtacggagtttgatagtccagatgtagataatgaa
gtcctgatcaatgctgagcaacattacttatcagttggttcttttgttaatgtaaaaatt
accgaagctgaagattttgatctgtttgcagttcctgttgaggagtag
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