Nonlabens dokdonensis: DDD_2315
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Entry
DDD_2315 CDS
T02441
Name
(GenBank) putative ABC peptide transporter, periplasmic binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDD_2315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndo02000
]
DDD_2315
Transporters [BR:
ndo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DDD_2315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AGC77442
UniProt:
L7WB63
LinkDB
All DBs
Position
complement(2519605..2521146)
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AA seq
513 aa
AA seq
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MVIITSCNESDQEIDPTTVFRYNEHANVTSLDPAFAKDQRNIWVCNLLYNGLVKLDQNLD
VVPDLTSHWEVDSTATIYKFYLKKDVYFNDAFAKARTVTAQDFKYSLERLIDPKVASPGA
SVLQNVEEIKALGELELEITLKQPFPAFLGLLSMKYCSVVPDGSTNLREHPIGTGPFYLK
RWQENVKMVLRKNERYFEKDKNGAQLPYLEAVAITFKTDKQSEFLEFAQGNLDFINAIDP
SYKDELLTTSGTLKLKYLEDVHLIKSPFLNTEYLGIKIDNDVPELQSKNLRKAINYGFDR
NKMIKYLRNNIGTPAQHGFIPDGLPAGGVVKGYSYNPELAQKLIDSYKKETGDFQPSITI
STGANYLDLCEFIQKEMQKIGLEVKIDVMTPSALRQARKDGQLDIFRSSWIADYPDAENY
LALFYSKNFSPAGPNYTHFKNSLYDSLYERSLRSTNPEKRKNLYIKMDSLIIEEAPIVPL
YYDQSVRFISKDVKNLESNAVNMLDLTRVRKEK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ttggtaattattacttcatgtaatgaatcagatcaagaaattgatcctacaacggttttt
aggtacaacgagcatgcaaacgtgaccagtctggaccctgcgtttgcaaaagatcaacgt
aatatttgggtatgtaacctattgtacaatggccttgtaaaattagatcaaaatttagac
gttgttccagatcttacctctcactgggaagtagattctactgctactatttacaaattt
tacttaaagaaagatgtttattttaatgacgctttcgcgaaagcgagaacagtaacagca
caagattttaaatattccctcgagcgattaatagaccctaaagtggcatcgcctggtgct
tctgtactgcaaaatgtggaagagataaaagcattaggagaactagaattagaaattacc
ttaaaacaaccttttcctgcatttttaggattgctatccatgaagtactgcagtgtggtg
cccgatggaagcacaaacctaagagaacaccctataggtactggacctttctatctcaaa
agatggcaagaaaatgtaaaaatggtattgcgtaaaaatgaacgttactttgagaaggat
aagaacggcgcgcagttgccctatctagaagcagttgcgattacatttaaaaccgataaa
cagagtgaatttttagaatttgctcaaggtaacctcgattttatcaacgcgatagaccct
agttataaagatgaactgttgacgacatctggaaccttaaaattaaaatacctagaagat
gtacatcttattaaatctccgtttttaaatacagaatatttaggtattaagatcgataat
gatgtaccagagctacaaagcaagaatctaagaaaagctattaattatggttttgataga
aataaaatgatcaaatacctgcgcaacaatataggaactcctgctcaacatggttttatt
cctgatggacttcctgctggcggcgttgtaaaaggttacagttataaccctgaattagct
caaaaattaattgactcttataaaaaagagacgggagattttcaacctagtattactata
agtactggagcaaattaccttgacctttgcgagttcatacagaaagaaatgcaaaaaata
ggtctcgaggttaaaatagatgtgatgacaccatctgcattgcgacaagctcgtaaagat
gggcaattggatatttttagaagcagctggattgcagactatcctgatgcggaaaattat
ctagcgcttttttattccaaaaacttctctccagctggacccaactatactcattttaaa
aatagtttgtacgatagcttatacgagcggtcgctacgaagtaccaatcctgaaaaaaga
aagaatctttacataaaaatggacagtcttattatagaagaagctcctattgtacctctt
tattacgatcaaagtgtgcgttttatttctaaggatgtaaagaatctagaaagcaatgcc
gtcaatatgcttgatcttactcgtgtaagaaaagaaaagtag
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