Nonlabens dokdonensis: DDD_2339
Help
Entry
DDD_2339 CDS
T02441
Name
(GenBank) LysM domain protein
Organism
ndo
Nonlabens dokdonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AGC77466
UniProt:
L7WC21
LinkDB
All DBs
Position
2550889..2552841
Genome browser
AA seq
650 aa
AA seq
DB search
MCLAFAKAEATILQNYRQHTVAQGETIYTLTQKYKVTSKQLLELNPDLSSGLRYGQVLLI
PAQNKVLTQRRIKKYKKHRVRRKETLYSLAKKYEITELDIKEANKELYSNPLKKGDRIQI
PVFEEVELTVVEPNKEEVPAIEVPLEDGKYKVKQGEGMYGIATKFGIKVLDLKKLNPNIG
DLKPGMVLNVPKSNAVQNEGELIGQDGNDTQIDNQKLIEYTIPKKMGMYSLKKLTGISED
SLIQWNPKLKDGLKEGMKIIYPNPNYGKEVVKVPTKVNSNKIASLVDSLNNFERQRLAIM
LPFSLQKIDGENTDRDNLKQDRAMRIALDFYSGVKIAIDSANTMGIPVDHDIFDTQKSLQ
ATKNILDATDFADYNTVIGPLISTNVVETAKELKSFNTPVVSPLTSTDVRLYRNLFQARP
EEEVLKNKLKEYLIEYAKGKNVIIVTDNNNQELKNEFTTILPAANVLVPNAKKNYIFSIE
YIKQLKPDVENVIVLAVDNVGFITDAVTNYSAKTDTHKITMFGLGNYEEMELSNIRLSKL
NYVFPQMFKESVDTNSFIEKYYSIHQITPNSYATRGFDITLDIILRQASASDLYESAMKN
GKTVMTENKFDYSKKFLAGFYNDAVYLLQYQEDLSIKELDINNLKVDTEE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctcgctttcgcgaaagcggaagcaacaatcctgcaaaattataggcagcatact
gtagcacaaggagaaactatttatacactaactcaaaagtataaggtaacttctaaacaa
ttactagaacttaatccagacttaagctcaggtttaagatatggtcaagttttgttgata
ccggcacaaaataaggtgttaactcagcgtagaataaagaaatacaaaaagcatcgtgta
cgacgcaaggaaactttgtatagtctagcaaaaaaatacgaaattactgagttagacatt
aaagaggcaaataaagaattgtattctaatcctctgaagaaaggagatcgcattcaaatt
cctgtttttgaagaagtagaacttactgttgtagaacctaacaaagaagaagttccagct
attgaggtgccgcttgaagatggcaagtacaaagtgaagcaaggcgagggaatgtacggt
attgcgactaaatttgggatcaaagttttagatcttaaaaagctcaatcctaatatagga
gatttaaaaccaggaatggtattgaatgttcctaaatcaaatgctgtacaaaatgaagga
gaactcattggtcaagatggaaacgatacacaaatagataatcaaaaattaattgaatat
accattcctaagaaaatgggaatgtactcgcttaaaaaattgactggaatctcagaagac
tctttaattcaatggaatcctaagttaaaggatggtctaaaggaaggaatgaaaatcatt
tatcctaaccctaattatggaaaagaggtcgttaaggttccaactaaggtgaattcaaac
aaaatagcttctttagtagatagtttaaacaattttgaaagacagcgacttgcgatcatg
ttgccattttcacttcagaaaatcgatggagaaaatacagatcgagataatctgaaacaa
gatcgtgctatgcgtatagcgctagacttctatagtggtgtgaaaatagcaatcgacagt
gcaaatactatggggataccagtagatcatgatatttttgatacgcaaaaaagtcttcag
gcaactaagaatattcttgacgccactgattttgcagactacaataccgtgataggaccg
cttatttctacaaatgttgtcgagaccgcaaaagaattgaaatctttcaatactccggtg
gtttctccacttacctctacagatgttaggctgtaccgtaacttattccaagcaagacca
gaagaagaagttcttaaaaataaactcaaggaatacttaatagaatatgcaaaaggtaag
aatgtgataattgttacagataataataaccaagagttaaaaaatgaatttactaccatt
ttacctgccgcaaatgtcttagtcccaaatgctaagaagaattatatttttagtatagag
tatatcaaacaattgaagccagatgtagaaaatgtaattgttcttgcagtagataatgta
ggtttcattacagacgccgtgacaaattattctgcgaaaacagatactcataaaataacg
atgttcggtttaggaaattatgaagagatggaactgtctaatataagactatctaaatta
aattatgtatttccccaaatgttcaaagaaagtgtagatacgaattcatttattgaaaag
tattatagcatacatcaaatcacacctaattcttatgcgacaagaggatttgatattaca
cttgatatcatattgagacaggcaagcgcttctgatttatatgagagcgctatgaaaaat
ggtaagacagtgatgacagagaataaatttgattattctaaaaagtttctagcaggcttc
tataacgatgccgtttatcttttacagtatcaagaagatttgagtattaaagaattagat
attaacaatcttaaagttgatacagaagaatga
DBGET
integrated database retrieval system
