Nonlabens dokdonensis: DDD_2580
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Entry
DDD_2580 CDS
T02441
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo00300
Lysine biosynthesis
ndo00470
D-Amino acid metabolism
ndo01100
Metabolic pathways
ndo01110
Biosynthesis of secondary metabolites
ndo01120
Microbial metabolism in diverse environments
ndo01230
Biosynthesis of amino acids
Module
ndo_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DDD_2580 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DDD_2580 (dapF)
Enzymes [BR:
ndo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DDD_2580 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
DUF5735
Motif
Other DBs
NCBI-ProteinID:
AGC77707
UniProt:
L7WBV3
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All DBs
Position
2795733..2796515
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AA seq
260 aa
AA seq
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MKTIPFYKYQGTGNDFIIIDNRQHIFDKNSTHKIEKLCDRKFGIGADGLMLLENHDQLDF
TMVYYNADGNESTMCGNGGRCLVHFAQHLGIVQDKASFEAIDGIHHAHLYANGEVSLQMS
NVSSLQVFDGHVFTNTGSPHHVQLTDNVEHTDVVSQGRHLRNTLYGKEGANINFVEPQGG
NLFKVRTYERGVEDETLSCGTGVTAVALAMHHTQQTDDHQVQLRTPGGDLKVKYQPTPGG
YKDIWLTGAATQVFKGEVLI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaattccattctataagtatcaaggtaccggtaatgattttataatcatagac
aatagacagcacatttttgataagaacagtactcataaaattgaaaagctatgcgatcgt
aaattcggaataggtgctgacggtttgatgttactagaaaaccacgatcaacttgacttt
acgatggtctattataatgcagatggaaacgaaagtaccatgtgtggtaatggtggtcgt
tgtctagttcattttgctcaacatttaggaattgttcaggataaagcttcctttgaagcg
atagatggaatacatcatgcacatttatatgcaaatggagaagtaagcttgcaaatgagt
aatgtaagttcgcttcaggtatttgacgggcatgtatttacaaatactggttcgcctcac
catgtacaactcaccgataatgtagaacatacagatgtggtttctcaagggagacacttg
cgcaacactctttacggtaaggaaggagcaaacatcaattttgtagaacctcaaggaggc
aatttatttaaagtgcgcacttatgagcgaggtgtagaagatgagacactaagctgtgga
actggcgttactgcagttgcactagctatgcatcatacacaacaaactgatgatcaccaa
gtacaattaagaactccaggaggtgatcttaaagtaaaataccagcctacaccaggcggt
tacaaagacatctggcttactggtgctgctactcaagtttttaaaggagaagtattgata
tga
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