Nonlabens dokdonensis: DDD_3024
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Entry
DDD_3024 CDS
T02441
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo03030
DNA replication
ndo03430
Mismatch repair
ndo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDD_3024
03430 Mismatch repair
DDD_3024
03440 Homologous recombination
DDD_3024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndo03032
]
DDD_3024
03400 DNA repair and recombination proteins [BR:
ndo03400
]
DDD_3024
Enzymes [BR:
ndo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DDD_3024
DNA replication proteins [BR:
ndo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DDD_3024
DNA repair and recombination proteins [BR:
ndo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DDD_3024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
DUF7902
Motif
Other DBs
NCBI-ProteinID:
AGC78151
UniProt:
L7WDY2
LinkDB
All DBs
Position
complement(3259969..3261246)
Genome browser
AA seq
425 aa
AA seq
DB search
MYAIVDVETTGGKYNEEGITEIAIYKFDGHEIVDQFASLVNPEKEIQPFVVKLTGINNAM
LKRAPKFYEVAKRIIEITNDVTLVAHNAEFDHRMLRLEFERLGYDYQKPTLCTVELAQTL
LPDQESFNLGKLTKALGIPITDRHRATGDALATVKLFKLLLQKDIDKNIISKSLKHHKPL
KLQSNLKELLDDVPNSTGVFYIYNKNNEIIYISKSKNIKRRVTQLFTGSNGKSKAIQKQV
SEVKYEKTGSQLISILKEYIEVRKHKPFLNGKPKKSNFSHGLYISKDQNENQQLNIKSVK
SNPDYSISFSSYRSGLTFIEKQLEDIDIADAGKATDILIEKIENLYTLKNKSKIIVDRGR
EASERSVILIVNGKVLGYAYVNLRIQMTDVKMLKSLLTPLESSDQITHIISSYLIYKRVY
QVIDL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaattgtagatgtagaaaccactggtggaaagtataacgaagaaggaataact
gaaatagccatttataaatttgatggacatgaaatagtagatcaatttgcaagcctagta
aacccagaaaaggaaatacaaccttttgttgttaagcttactggaattaacaatgcgatg
ttgaaaagagctccaaagttttacgaagtagctaaaagaattattgaaataactaacgac
gttactcttgtcgcacataatgccgaatttgatcatagaatgctgcgtctagaatttgag
cggctgggatatgattatcaaaagcctacactttgtactgttgaactagcgcaaacttta
cttccagatcaggaaagttttaatcttggaaaactaactaaagcgttaggtattcctata
actgatagacatcgtgcaactggtgacgcattagcgactgtaaaattgtttaaattactt
ctacaaaaagacatagataaaaatattatctcaaaaagcctaaaacatcataaaccttta
aaactacaatccaatttaaaggaactgcttgatgatgtccctaattctacaggtgttttt
tacatatataataagaacaatgaaattatctatataagtaagagcaagaatataaaaaga
agagttacacaactctttaccggatcaaatggtaaatctaaggctatccaaaagcaggtg
tctgaagtgaaatatgaaaaaactggtagccagcttatttctattttaaaagaatatatt
gaagtacgcaagcacaagccatttctaaatggtaaacccaaaaaatctaatttctcacac
ggtctatatatttcaaaggatcaaaatgaaaatcaacaattgaatatcaaatctgtaaaa
agcaatcctgattattcaattagtttttccagttacaggtcaggacttacttttatagaa
aagcaattagaagatatagatattgcagatgcaggaaaggcaactgatattttgattgag
aaaattgaaaacttatatactcttaaaaataaaagtaaaattatagtagatcgcggtaga
gaagctagcgagcgcagtgtgattcttattgtgaatggtaaagtcttaggctatgcttac
gttaatctgagaattcaaatgaccgatgtaaaaatgcttaaaagccttttgacacctttg
gagtctagcgatcaaatcactcatatcataagcagttatttaatttacaaaagagtttat
caagtaattgatttgtag
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