Nonlabens dokdonensis: DDD_3028
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Entry
DDD_3028 CDS
T02441
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ndo
Nonlabens dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ndo03110
]
DDD_3028 (clpB)
Chaperones and folding catalysts [BR:
ndo03110
]
Heat shock proteins
HSP100
DDD_3028 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
AAA_14
nSTAND3
AAA_7
Zeta_toxin
IstB_IS21
DNA_pol3_delta2
TniB
AAA_3
Mg_chelatase
AAA_24
NACHT
TsaE
Roc
bpMoxR
AAA_18
AAA_28
ResIII
T2SSE
DUF6092
ATPase_2
AAA_25
Torsin
DUF1090
DUF87
Trp_dioxygenase
DUF4407
Motif
Other DBs
NCBI-ProteinID:
AGC78155
UniProt:
L7W8W5
LinkDB
All DBs
Position
complement(3268646..3271255)
Genome browser
AA seq
869 aa
AA seq
DB search
MNPNKLTIKSQEALQQAQQLVQEYGQQQIENAHLFLAITMVDENVFPFLFKKLNVKLDLI
KELVKSQINSFPKVDGGDLQLSRETNRVLNAAMSLATKMGDEYVSIEHLLLCIFDGKSKT
AQILKDQGISKKNLEAAIEELRNGNTVSSQSAEETYNSLNKYAKNLNQLADQGKLDPVIG
RDEEIRRILQILSRRTKNNPMLVGEPGVGKTAIAEGLAHRIVGGDVPDNLKNKQIFSLDM
GALIAGAKYKGEFEERLKAVIKEVTTSSGDIVLFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLDEYQKYFEKDKALERRFQKVIVDEPDTESAISILRGIKDKYETHHK
VQIKDDAIIGAVELSQRYITNRFLPDKAIDLMDEAAAKLRMEINSKPEELDVLDRKIMQL
EIEIEAIKRENDESKLKNLRSELANLKESRNELNAQWENEKSVVDNIQNAKTDIENFKLE
AERAEREGDYGKVAELRYGKIKQAQEELDQLQAAMEANDSTNNLIQEEVTYDDIAEVVAK
WTGIPVTKMLQSEREKLLKLEDELHHRVVGQSEAILAVSDAVRRSRAGLQDQNKPVGSFL
FLGTTGVGKTELAKALAEYLFNDENSMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQL
TEAVRRKPYSVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNSIIIMTSNMGA
ELIQERFQNAASVTDSLLDETKKEVLISLKKRVRPEFINRIDDIVMFTPLNENEIKEIVS
LQLKGVTKLLAKQGIVIDATEQAINLLAKKGYDPQYGARPVKRVIQREILNELSKQILSA
QIVTDSIVLIDAFEDELVFRNETDSVEVI
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctaataaattaactataaaatcacaagaggctttgcagcaagcacagcaactt
gtacaagaatacggacagcaacaaattgaaaacgcgcatttatttctagctataactatg
gtagatgagaatgtttttccttttctatttaaaaagctcaacgtaaaacttgatcttatc
aaagaacttgtaaaaagtcaaattaactcttttccaaaagtagatggaggcgatttacaa
ctgtctcgggagactaacagagttttaaatgcagccatgagtcttgccacaaaaatggga
gatgaatatgtaagtattgaacatttattactatgcatatttgatggcaaatctaaaact
gctcaaatacttaaagatcaaggtatttctaagaaaaatttagaagccgctatcgaagaa
ttgagaaatggaaatactgtttcttctcaaagtgctgaagaaacctataactccctaaat
aaatatgcaaaaaacctcaatcaactagcagatcaaggtaagttagatcctgttattggt
agagatgaagagatacgtcgtattctccaaattctatcgagacgtacaaaaaataaccct
atgctagtaggagaacctggggtgggaaaaacagctattgctgaaggtctggctcatcgc
attgtaggcggtgatgtacctgataatttgaagaataaacaaatattttctttggacatg
ggagcgctcattgctggagcaaaatataaaggtgaatttgaagaacgattaaaagcggta
ataaaagaagtaacaacaagttctggcgatatcgtccttttcattgacgaaattcacact
cttgtaggagctggcggcggtgaaggcgccatggatgctgcaaatattctcaaaccagcg
ctagctcgtggtgagttgcgcgccattggagctacaactttagatgaatatcaaaagtat
tttgaaaaagataaagctctagagagacgctttcaaaaagtaatcgtggacgaaccagat
acagaaagtgctatctccatactaagaggtataaaagataaatatgaaacacatcataaa
gtacagataaaggatgatgcaattataggcgccgtagagttatcacagcgttatatcact
aatagatttttaccagataaggctattgatttaatggatgaagctgctgcaaaactgcgc
atggagatcaattccaagccagaagagttagacgtgctcgatcgtaaaatcatgcagcta
gaaatcgaaatcgaagccattaaaagagaaaacgatgagtccaagctcaaaaatttaaga
tctgaactggctaatctcaaagaatctcgcaacgagcttaacgctcaatgggagaatgaa
aaaagcgtagttgacaatattcaaaatgcaaaaacagatattgagaactttaaactagaa
gcagaacgtgctgaacgtgaaggcgattatggtaaagtggcagagttgcgttatggtaaa
atcaagcaagcacaagaagagttagatcaacttcaagccgcaatggaggcaaatgatagc
actaacaatcttattcaagaagaagtaacttatgacgatattgccgaagtagtcgctaaa
tggactggaatcccagtgacgaagatgttacaaagtgaacgagaaaagttattaaaatta
gaagatgagctacatcatcgtgtagtagggcaaagcgaagctattctagcagtaagtgac
gcagtgagaagaagccgcgcaggtttacaagatcaaaataagcccgtaggttcctttctt
tttctaggtacaactggagtaggtaaaacagaacttgccaaagcacttgcagagtatctg
tttaatgatgaaaattctatgactcgtatagatatgagcgagtatcaagaacgtcatagc
gtgagtagattagtaggagcacctccaggatatgtaggatatgatgaaggtggtcaactt
actgaagcggtacgtcgcaaaccttacagtgtcgtcttactggatgagattgaaaaagca
catcctgatactttcaacatcttactacaagttcttgatgaaggaagacttaccgataat
aaaggtcgtgttgctgactttaaaaacagtattatcatcatgacttctaatatgggagca
gaattgattcaagaacgttttcagaatgcagcctcggtaacagactcattactcgatgaa
actaaaaaagaggtattaatttctttaaaaaagcgagtgcgtccagagtttatcaatcgt
attgatgacatcgttatgttcacacctctcaatgaaaatgaaatcaaagagatcgtaagt
ttacaacttaaaggagttacaaaattacttgcaaaacaagggatcgtgattgatgcaaca
gagcaagctatcaacctacttgcaaagaaaggatatgatccacagtatggtgctaggcca
gtaaagcgcgttattcaacgtgaaattctaaacgaactatctaaacagattttatctgct
cagattgtcacagatagtattgttctcatcgatgcttttgaagatgagttggtttttaga
aatgaaactgattctgtagaggtcatttaa
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