Nonlabens dokdonensis: DDD_3234
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Entry
DDD_3234 CDS
T02441
Name
(GenBank) DNA mismatch repair protein, MutS family
KO
K07456
DNA mismatch repair protein MutS2
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DDD_3234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndo03400
]
DDD_3234
DNA repair and recombination proteins [BR:
ndo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DDD_3234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
DUF5713
Motif
Other DBs
NCBI-ProteinID:
AGC78361
UniProt:
L7WEL7
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All DBs
Position
3475770..3477953
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AA seq
727 aa
AA seq
DB search
MKKISTKTIEDLEFDVVLTQASAYCVTEDGKAAITKLQPFTTKFLINRELAYTNEYLWSF
SSEHRIPNHGFDVIDKELQLLGIENSTLEKESIRKLAVLPRTVNEHIKFFKKLQEYFPQL
HKRLEHIAYNEIIPNQVDAVMDRFGEIKDDASPLLKNLRREMNIVRGQLNGSFGQALSHY
SQLDYLDEIRESVVENRRVLAVKAMYRRKVKGKMMGSSRTGSISYIEPERVLTLSRKLSE
LEIEELEEIQRILKELTEFLRAFIPEFEEYKEYLTHTDVIAAKAKYGRKIKGCLPMMVDH
QELELVDAYHPLLWVANNERGEKTYPQTIRLAPDNRIIVISGPNAGGKSITLKTIGLLQL
MIQTGMLIPVHEKSRICIFEHVLTDIGDNQSIDNHLSTYSYRLKNMRGFLRIANDKTLFL
IDEFGTGSDPELGGALAESMLEELNERKSYGIITTHYTNLKMLANELPEMTNANMLFDSR
SLEPVYQLQLGEAGSSFTFEVAQKNGIPYSLINKAKKKVERGKIRFDKSIAALQKERSNL
RRNNDKLRDKEVQATQRANKLEDTQERVHQKLQDFQELYDGYQRFIQLGKKFDSIAENFE
NNKKKKLLVDELMKLVITENIKRKPKQKKKTTNSKKEKAVKGKQKQVENEVIQKVQKIRT
ERKKAKVEEVKKEEEKPQIPLKINDKVRLADSKSVGTIDSISKGKVTINYGFFTTIAPIE
QLEKVGK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatatctacaaaaacaattgaagatttagaatttgatgtagttcttactcag
gctagtgcttattgcgttacagaagatggaaaagcagctattacaaaactacagcctttc
acgactaaattcctaattaatagagaacttgcctatactaatgagtatttatggtccttt
tctagcgagcacagaatccctaatcatggttttgatgttatagataaggagcttcagttg
ttaggtattgaaaatagcaccttagaaaaagaaagcattagaaaactagccgttttacca
cgcaccgtaaatgagcatatcaagttttttaaaaaactacaagagtatttcccacaacta
cataaaagactagaacatattgcctataacgagatcatcccaaatcaggtagatgccgta
atggaccgttttggcgagatcaaggatgacgcttctcctctattaaagaatcttagaaga
gaaatgaacattgtacgagggcagctcaatggtagttttggccaggcattgagtcattac
agccagctggattatctagatgaaataagagaaagtgttgtagaaaaccgccgtgtacta
gctgtaaaagctatgtatagacgcaaggtaaaaggtaaaatgatgggaagctctaggact
ggaagcatctcctatattgaaccagagcgtgtgttaacgctttcgcgaaagctgtctgaa
ttagaaattgaagaactagaagaaatacaacgaattttaaaagagctcacagagttttta
agagcttttattccagaatttgaagagtacaaagaatatttaacgcacaccgatgtgatt
gctgccaaagcaaaatacggtaggaaaatcaaaggatgtttacccatgatggtagatcat
caagagctggaattagtagatgcttatcatccactgctttgggttgctaataatgagcga
ggagaaaaaacgtatccacaaacgatacgactagcgccagataatcgcattatcgtgatc
tctggtcctaacgctggtggtaaatccataaccttaaaaactatcggtctactgcagctc
atgattcaaaccgggatgctgataccagttcatgagaaaagtaggatatgtatttttgaa
catgtattgacagatattggtgataatcaaagtattgataatcatttgagcacctacagt
taccgacttaaaaacatgcgtggtttcttaagaatcgcaaatgataaaacgctgttttta
attgacgaatttggaacaggatctgatccagaattaggtggagcgctggcagaaagtatg
ctggaagagctcaacgagcgtaaatcttatggcattattacaacccattataccaacctt
aaaatgctggcaaatgagttgccagaaatgactaatgcaaacatgttgttcgactccaga
tcgctagaacctgtctatcaattacaattaggagaagctggaagctcttttacgtttgaa
gttgcacaaaagaatggtattccttattctttaattaataaagccaaaaagaaagtagaa
cgaggcaaaatacgttttgataaatctattgccgctctacaaaaagagcgatccaactta
agacgtaataatgacaagttgcgagataaagaggttcaagccacacaacgtgcaaataaa
ctagaagatactcaagaaagagtgcatcaaaagttacaagactttcaagagttgtatgat
ggttaccagcgttttatacagttaggaaagaaatttgacagcattgcagaaaactttgaa
aacaataagaaaaagaaacttcttgtggacgagttgatgaaattagtcatcactgaaaat
atcaagcgcaagcctaagcaaaagaagaaaactacgaattccaagaaggaaaaagctgtt
aaaggaaagcaaaaacaagtagaaaacgaggtgattcaaaaagttcaaaaaataagaacc
gaaagaaaaaaggctaaagtagaagaagtaaaaaaagaagaagaaaagccacaaatacct
ttaaaaataaatgataaagtacgcctagccgattctaagtcggtaggtactatcgatagt
ataagtaaaggaaaagtaactattaattatggttttttcacgactattgcgcccatcgag
caattagaaaaagtagggaaataa
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