Nonlabens dokdonensis: DDD_3545
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Entry
DDD_3545 CDS
T02441
Symbol
kdsB1
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo00541
Biosynthesis of various nucleotide sugars
ndo01100
Metabolic pathways
ndo01250
Biosynthesis of nucleotide sugars
Module
ndo_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DDD_3545 (kdsB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ndo01005
]
DDD_3545 (kdsB1)
Enzymes [BR:
ndo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
DDD_3545 (kdsB1)
Lipopolysaccharide biosynthesis proteins [BR:
ndo01005
]
Lipid A
DDD_3545 (kdsB1)
BRITE hierarchy
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
AGC78672
UniProt:
L7WEG3
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Position
complement(3817620..3818357)
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AA seq
245 aa
AA seq
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MKVVGVIPARYKSSRFEGKPLALINKKPMIIHVAEQVEKAIGKDNTFVATDDQRIYDLVI
SSGYQCVMTPDNCKTGTDRIWEFAKIVNADIYLNVQGDEPMVSPEDILKIIVEKKVNMNL
VVNGMLPMSTQEDPKDINIPKVLVNKHNDLIYMSRLPIPGIKDSNMKFKPTYLKQVCIYA
FSYEELEIYGSNNTKSLFESFEDIEILRFMDFDIKIRMVMMETETIAVDNPGDIIKVENA
LKKLQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtaggagtaatcccagcaagatataagtcttccagatttgaaggtaagcca
cttgcgttgataaataaaaaacctatgatcattcatgttgcagagcaagttgaaaaagct
ataggtaaggataatacatttgtggctaccgacgaccaaaggatttatgatctagtcatt
tcctcaggatatcagtgtgtcatgactccagataattgcaaaactggaactgacaggatt
tgggaatttgcaaaaatagtcaacgctgatatttacttaaatgttcaaggagatgaacct
atggtatctcctgaagatattctcaaaatcatcgtagaaaaaaaagtaaacatgaatctc
gttgtgaatggcatgctacccatgtcaactcaagaagatcctaaagatattaatattcct
aaagttcttgtaaataaacataatgatttgatttatatgtctcgtttacctattcctggt
attaaagacagtaacatgaaatttaaacctacttacctaaaacaggtttgtatctatgcc
tttagctatgaagagctagagatctatggttcaaataatacaaaaagtttatttgaaagt
tttgaagatattgaaatcttgagatttatggattttgatataaaaattagaatggtaatg
atggaaaccgaaaccatagcggtagataatcctggagacataattaaagtagagaatgcc
ttaaaaaaattacaatga
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