Nonlabens dokdonensis: DDD_3546
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Entry
DDD_3546 CDS
T02441
Name
(GenBank) putative HMGL-like family protein
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo00360
Phenylalanine metabolism
ndo00362
Benzoate degradation
ndo00622
Xylene degradation
ndo01100
Metabolic pathways
ndo01120
Microbial metabolism in diverse environments
ndo01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
DDD_3546
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DDD_3546
00622 Xylene degradation
DDD_3546
00621 Dioxin degradation
DDD_3546
Enzymes [BR:
ndo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
DDD_3546
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
NeuB
Motif
Other DBs
NCBI-ProteinID:
AGC78673
UniProt:
L7WI42
LinkDB
All DBs
Position
complement(3818360..3819904)
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AA seq
514 aa
AA seq
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MKKGLKLLDCTLRDGGYYTNWDFDKQLVKDYCSAMESLPIDYVEIGYRSVELDGYLGEYF
YCPVYKMKELKGMMPNKKLVIILDEKNVGIQDIDDLLDPCVNFISMVRIAISPNSFDKAI
PLAKAIKEKGFEVGFNIMYMSSWIENKDFIEKIPLIDGLVDYFYMVDSYGGVFPKDVEQI
AKLVKSKTNCQIGFHGHDNLEMGLINSITAIDCGCSIIDSTITGMGRGAGNLKTELLMTY
FASKLNWDVSFDKLSDVVADFEKLQEYHKWGTNLPYMISGAYSLPQKDVMSWISKRRYSI
GGIVNALQEQVIEGDVNSFDLLPRDASFNRAIIIGGGDSTLSNFKAVKSYIELYKDDGLC
IIHAGTRYAEVFNTFEVPQFYCLAGNEGYRLQKVFDNLSLIEHKCVLPSKRSMGSFVPKE
ILNHTFELSEATFTDQYQDSPLAIAIDICLYLSIKNLDFIGFDGYDITVNKSEFDIAKEN
QYLFDKIKSQDINFSSLTSTKYQIKESSIYSKIK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggacttaaattactcgactgtactttaagagatggaggatactacactaat
tgggattttgataagcaattagttaaggattattgctctgctatggaatcgctacctata
gactatgtggaaataggatatcgtagtgtagaattagatggttatttaggagaatatttt
tattgtccagtctataagatgaaagagcttaagggtatgatgcctaacaaaaaactggtg
atcattttagacgagaaaaatgtaggtattcaagatattgatgatctattagatccttgt
gtcaattttatatcaatggttagaattgcgatctctccaaatagttttgataaagcaatt
cctctagcaaaggcaattaaagaaaaaggatttgaagtaggttttaatataatgtacatg
tcatcatggattgaaaacaaggattttattgaaaagattcctttaatagatggtcttgtt
gactacttttatatggtagactcttatggaggtgttttccctaaagatgtagaacaaata
gcaaagttagttaaatcaaaaactaattgtcaaattggttttcacggtcacgataatctt
gaaatgggtttgataaatagtataacagcaattgactgtggttgtagtataatagattct
actataacagggatgggaagaggtgctggaaacctcaaaacggaacttctaatgacttat
tttgcatctaaattgaattgggatgtgtcttttgacaaactcagtgatgtggtcgcagat
tttgagaaattacaagaatatcataaatggggaacaaatttaccttacatgatttctggt
gcatactctcttcctcaaaaagatgtaatgagttggatatcaaaaaggagatattcgata
ggtggaattgtaaacgcattacaagaacaagtaatagaaggagatgttaatagttttgat
cttcttcctcgtgacgcatcttttaatagggctattattattggaggaggcgattctacc
ttgtctaattttaaagctgttaaatcgtatatagagctttacaaagatgatggtctttgt
attatacatgcgggaacaaggtacgcagaggtttttaacacctttgaagttcctcaattt
tattgtttagctggtaatgaaggttatagactgcaaaaagtatttgataatttatcttta
attgagcataaatgtgtattaccgtctaaaagaagtatggggtcttttgtcccgaaagaa
atattgaatcacaccttcgagctatcagaagctacctttaccgatcaatatcaagactca
cctcttgctatagccatagatatatgtctttatttaagtattaaaaacttagattttatt
ggctttgatggttacgatatcactgtaaataaatctgaatttgatatagcaaaagaaaac
caatatttatttgataaaattaagtctcaagacatcaacttttcttctcttacaagcaca
aagtatcaaataaaggaaagttctatctatagcaaaataaaataa
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