Nocardioides daphniae: E2C04_00030
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Entry
E2C04_00030 CDS
T05939
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ndp
Nocardioides daphniae
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndp03032
]
E2C04_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
ndp03400
]
E2C04_00030 (gyrB)
Enzymes [BR:
ndp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E2C04_00030 (gyrB)
DNA replication proteins [BR:
ndp03032
]
Prokaryotic type
DNA Topoisomerases
E2C04_00030 (gyrB)
DNA repair and recombination proteins [BR:
ndp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E2C04_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
CARDB
Motif
Other DBs
NCBI-ProteinID:
QCC78545
UniProt:
A0A4P7UGS4
LinkDB
All DBs
Position
6366..8408
Genome browser
AA seq
680 aa
AA seq
DB search
MSGDYDASAIQVLEGLEAVRKRPGMYIGSTGVRGLHHLIWEIVDNSVDEALAGHCDRIVM
TLNPDRSVTVTDNGRGIPTGTAPGQELPAVTLALTVLHAGGKFGGGGYKVSGGLHGVGVS
VVNALSSNLVVEVKNRGHLWRQSFTVGVPDGELEQVRPLEDGEETGTSVTWWASEDIFET
TDYDLETITTRIREMAFLNRGLEIVVRDHRESAAELAEVIEDNTTEADRAKDAIHRDEVG
IEQVFKYERGLVDYVEYLNRRKDKANATVIAFEADSAEFGAKGDDRHMSLEVAMQWNSSF
AESVHTFANTINTHEGGTHEEGFRAALTSLVNNWGEEWGLIKKKEDRVSGDDIREGLTAI
ISIKLGEPQFEGQTKTKLGNTEAKGFTQRVVNDQLGAWLEQNPAEGKEIIRKAQAAASAR
IAARKARDLARNRKGLLGGGGLPGKLADCQSTNAAECEVFIVEGDSAGGSAKSGRDPRIQ
AILPIRGKILNVEKARIDKVLGNQEVQAIISALGTGVHEEFDVEKLRYHKVVLMADADVD
GHHINTLLLTLLFRFMKPLIEHGYVYMAMPPLYRLRWNKPAEHEFVYSDAERDALMREGL
ENGKKLPKDNPVQRYKGLGEMNADELWETTMDPDQRLLQKVTLDDAARADEIFSILMGED
VEQRRAFIQRNAKDVRFLDI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcgactacgacgcctccgccatccaggtgctcgaaggcctcgaggccgtccgc
aagcggcccggcatgtacatcggctcgaccggtgtccgcggcctgcaccacctcatctgg
gagatcgtcgacaactccgtcgacgaggcgctcgccggtcactgcgaccggatcgtgatg
acgctcaaccccgaccgctccgtcacggtgaccgacaacggtcgcggcatcccgaccggc
accgcgcccggccaggagctgcccgcggtcacgctcgccctcaccgtcctgcacgccggc
ggcaagttcggtggtggcggctacaaggtctccggtggtctgcacggcgtcggcgtctcg
gtcgtcaacgcgctctccagcaacctcgtcgtcgaggtgaagaaccgcggccacctgtgg
cgccagtcgttcaccgtcggcgtccccgacggcgagctcgagcaggtccgccccctcgag
gacggcgaggagaccggcacgtcggtgacctggtgggcctcggaggacatcttcgagacc
accgactacgacctcgagaccatcaccacccgcatccgcgagatggccttcctcaaccga
gggctcgagatcgtggtgcgtgaccaccgcgagagcgccgccgagctggccgaggtgatc
gaggacaacaccaccgaggccgaccgggccaaggacgcgatccaccgcgacgaggtcggc
atcgagcaggtcttcaagtacgagcgcggcctggtcgactacgtggaatacctcaaccgc
cgcaaggacaaggccaacgccaccgtcatcgccttcgaggccgactcggccgagttcggc
gccaagggcgacgaccggcacatgagcctcgaggtcgcgatgcagtggaactcatccttc
gcggagtcggtccacaccttcgccaacacgatcaacacccacgagggcggcacccacgag
gagggcttccgtgcagccctcacctccctggtcaacaactggggcgaggaatggggcctg
atcaagaagaaggaggacagggtctcgggtgacgacatccgcgagggcctgaccgccatc
atctcgatcaagctcggcgagccgcagttcgagggccagaccaagaccaagctcggcaac
accgaggccaagggcttcacccagcgcgtggtcaacgaccagctcggcgcctggctcgag
cagaacccggccgagggcaaggagatcatccgcaaggcccaggccgcggcgtccgcccgc
atcgccgcccgcaaggcgcgcgacctggcccgcaaccgcaagggcctgctcggtggcggt
ggcctgcccggcaagctggccgactgccagtcgaccaacgcggccgagtgcgaggtcttc
atcgtcgagggtgactccgcaggcggctccgccaagtcggggcgcgacccccgcatccag
gcgatcctgccgatccgcggcaagatcctcaacgtcgagaaggcgcgcatcgacaaggtc
ctgggcaatcaggaggtccaggcgatcatctcggcgctcggcaccggcgtgcacgaggag
ttcgacgtcgagaagctgcgctaccacaaggtcgtgctgatggcggacgccgacgtcgac
ggccaccacatcaacaccctgctgctcacgctgctcttccgcttcatgaagccgctcatc
gagcacggctacgtctacatggcgatgccgccgctctaccgcctgcgctggaacaagccg
gccgagcacgagttcgtctactccgacgccgagcgtgacgcgctcatgcgcgagggcctg
gagaacggcaagaagctccccaaggacaaccccgtccagcgctacaagggtctcggtgag
atgaacgccgacgagctgtgggagaccacgatggaccccgaccagcgcctcctccagaag
gtgaccctggacgacgccgcccgcgccgacgagatcttctcgatcctcatgggtgaggac
gtcgagcagcgacgggccttcatccagcgcaacgccaaggacgtccgattcctcgatatc
tag
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