Nocardioides daphniae: E2C04_04715
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Entry
E2C04_04715 CDS
T05939
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ndp
Nocardioides daphniae
Pathway
ndp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
E2C04_04715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndp03400
]
E2C04_04715
DNA repair and recombination proteins [BR:
ndp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
E2C04_04715
BRITE hierarchy
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Motif
Pfam:
Ku
UL11
HC2
CIS_TMP
Motif
Other DBs
NCBI-ProteinID:
QCC76695
UniProt:
A0A4P7UBK9
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All DBs
Position
complement(963790..964779)
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AA seq
329 aa
AA seq
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MRAIWKGSVSFGLVNVPVKLYSATESHDVSFRQVHEADGGRIKYQRICSIDGEEVPYSQI
AKGYETEDGEMVILTDDDFKDLPLTSSREISVEKFVPSDQIDPMLFEKSYYLEPDASGAK
AYALLREALVESDRMAVVTVALRQRTSVAVLRVRPTDNGDVIVLQTMMWPDEIRVPDFSV
ELGEVKDSEVKMAQMLVETLAGDFDATEFEDDYADAVEALVKAKIEGGEVKRTETSTKSS
GEVVDLLAALQKSVAAAKQARGEEVPEEASTPEKAAKKSTARKTTAKTAKTATKKTAAKK
TTAEKAASKSTAKKTASKATAKKQVKKAS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccatctggaagggctcggtctcgttcggcctggtcaacgtgccggtcaagctc
tactcggcgaccgagtcgcacgacgtctccttccggcaggtgcacgaggctgacggcgga
cgcatcaagtaccagcggatctgctcgatcgacggcgaggaggtcccctactcccagatc
gccaagggctacgagaccgaggacggcgagatggtcatcctcaccgacgacgacttcaag
gacctcccgctcacctcctcgcgcgagatctccgtggagaagttcgtgccgagcgaccag
atcgacccgatgctcttcgagaagtcctactacctcgagcccgacgccagcggcgccaag
gcgtacgccctgctccgcgaggcgctggtcgagtcggaccggatggccgtggtcaccgtc
gcgctgcgccagcgcacgtcggtggccgtgctgcgggtgcgccccaccgacaacggtgac
gtgatcgtgctccagacgatgatgtggcccgacgagatccgggtgccggacttctccgtc
gagctgggcgaggtcaaggactccgaggtcaagatggcccagatgctcgtcgagacgctg
gccggcgacttcgacgccaccgagttcgaggacgactacgccgacgccgtcgaggccctg
gtcaaggccaagatcgagggcggcgaggtcaagcgcaccgagaccagcacgaagagctcc
ggcgaggtcgtcgacctgctggcggccctgcagaagtcggtcgccgcggccaagcaggca
cgcggcgaggaggtgccggaggaggccagcacccccgagaaggcagcgaagaagtcgacg
gccaggaagacgacggccaagacggccaagaccgcgaccaagaagacggcggcgaagaag
acgaccgccgagaaggccgcctccaagtccacggccaagaagaccgcgtccaaggccacc
gcgaagaagcaggtcaagaaggcgagctga
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