KEGG   Nocardioides daphniae: E2C04_04715
Entry
E2C04_04715       CDS       T05939                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
ndp  Nocardioides daphniae
Pathway
ndp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ndp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    E2C04_04715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ndp03400]
    E2C04_04715
DNA repair and recombination proteins [BR:ndp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     E2C04_04715
SSDB
Motif
Pfam: Ku UL11 HC2 CIS_TMP
Other DBs
NCBI-ProteinID: QCC76695
UniProt: A0A4P7UBK9
LinkDB
Position
complement(963790..964779)
AA seq 329 aa
MRAIWKGSVSFGLVNVPVKLYSATESHDVSFRQVHEADGGRIKYQRICSIDGEEVPYSQI
AKGYETEDGEMVILTDDDFKDLPLTSSREISVEKFVPSDQIDPMLFEKSYYLEPDASGAK
AYALLREALVESDRMAVVTVALRQRTSVAVLRVRPTDNGDVIVLQTMMWPDEIRVPDFSV
ELGEVKDSEVKMAQMLVETLAGDFDATEFEDDYADAVEALVKAKIEGGEVKRTETSTKSS
GEVVDLLAALQKSVAAAKQARGEEVPEEASTPEKAAKKSTARKTTAKTAKTATKKTAAKK
TTAEKAASKSTAKKTASKATAKKQVKKAS
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcgtgccatctggaagggctcggtctcgttcggcctggtcaacgtgccggtcaagctc
tactcggcgaccgagtcgcacgacgtctccttccggcaggtgcacgaggctgacggcgga
cgcatcaagtaccagcggatctgctcgatcgacggcgaggaggtcccctactcccagatc
gccaagggctacgagaccgaggacggcgagatggtcatcctcaccgacgacgacttcaag
gacctcccgctcacctcctcgcgcgagatctccgtggagaagttcgtgccgagcgaccag
atcgacccgatgctcttcgagaagtcctactacctcgagcccgacgccagcggcgccaag
gcgtacgccctgctccgcgaggcgctggtcgagtcggaccggatggccgtggtcaccgtc
gcgctgcgccagcgcacgtcggtggccgtgctgcgggtgcgccccaccgacaacggtgac
gtgatcgtgctccagacgatgatgtggcccgacgagatccgggtgccggacttctccgtc
gagctgggcgaggtcaaggactccgaggtcaagatggcccagatgctcgtcgagacgctg
gccggcgacttcgacgccaccgagttcgaggacgactacgccgacgccgtcgaggccctg
gtcaaggccaagatcgagggcggcgaggtcaagcgcaccgagaccagcacgaagagctcc
ggcgaggtcgtcgacctgctggcggccctgcagaagtcggtcgccgcggccaagcaggca
cgcggcgaggaggtgccggaggaggccagcacccccgagaaggcagcgaagaagtcgacg
gccaggaagacgacggccaagacggccaagaccgcgaccaagaagacggcggcgaagaag
acgaccgccgagaaggccgcctccaagtccacggccaagaagaccgcgtccaaggccacc
gcgaagaagcaggtcaagaaggcgagctga

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