Nocardioides daphniae: E2C04_06095
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Entry
E2C04_06095 CDS
T05939
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E2C04_06095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndp03019
]
E2C04_06095
03009 Ribosome biogenesis [BR:
ndp03009
]
E2C04_06095
03036 Chromosome and associated proteins [BR:
ndp03036
]
E2C04_06095
Enzymes [BR:
ndp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
E2C04_06095
Messenger RNA biogenesis [BR:
ndp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E2C04_06095
Ribosome biogenesis [BR:
ndp03009
]
Eukaryotic type
90S particles
RNase
E2C04_06095
Prokaryotic type
rRNA processing factors
E2C04_06095
Chromosome and associated proteins [BR:
ndp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
E2C04_06095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QCC78646
UniProt:
A0A4P7UER3
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All DBs
Position
1235712..1236710
Genome browser
AA seq
332 aa
AA seq
DB search
MSVARSSDRVPPLTTQLRQALGDPVLTPELLERALTHRSYAYENGGLPTNERLEFLGDSV
LGVVVTETLYTNHPDLSEGRLAKLRAAVVNARALADVARSIGLGEHIKLGRGEETTGGRD
KASILSDTVEAVIGAIHLSGGFEVSREVVHRLFDPLMEAAAAMGAGLDWKTSLQELAASH
GLGVPEYVIQDEGPDHMKTFTAQVRVGDGLYGHGTGRSKKEAEQAAAQTAYSEISEARDA
AARGDDSPSETRPPCPSCPRSRSYAADSRPTSSVPASSAPRCSTPAPYAATRSGPRGSRR
PSPDVRSPPCDDAASTSGSPSTTPTPSSATSA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
ctgagcgtcgccaggtcctctgaccgggtcccacctctgaccacgcagctgcgccaagcg
ctcggggatcctgtactgacccccgagctgcttgagcgtgcgctgacccaccgctcgtac
gcgtacgagaacggtggtcttcccaccaatgagcgcctggagttcctcggggactccgtg
ctcggcgtggtggtgacggagactctctacacgaaccacccggacctgtccgagggtcgt
ctcgcgaagctgcgggccgcggtcgtcaatgctcgcgcgttggccgacgtggcccgctcc
atcggtctcggcgagcacatcaagctcggccgcggcgaggagacgaccggtgggcgtgac
aaggcgtcgatcctgtccgacaccgtcgaggcagtgatcggcgccatccacctgtccggt
gggttcgaggtctcccgcgaggtcgtgcaccggctcttcgacccgctcatggaggctgcg
gccgccatgggcgccggtctggactggaagacctcgctccaggagctcgccgccagccac
gggctcggcgtccctgagtacgtgatccaggacgagggtccggaccacatgaagaccttc
accgcccaggtgcgcgtcggcgacggcctctacggccacggcaccggacggtcgaagaag
gaggcggagcaggcagccgcccagaccgcctacagcgagatctccgaggcccgcgacgcc
gcggcccggggtgacgactccccgtctgagacgaggccgccgtgcccgagctgcccgagg
tcgaggtcgtacgccgcggactcgagacccacgtcgtcggtgcccgcatcctcggcgccg
aggtgctccacgcccgccccgtacgccgcgacccgctcgggcccgaggggttcgcgcagg
ccgtcgccggacgtacggtcaccgccgtgcgacgacgcggcaagtacttctggctcgccc
tcgacgacaccgacgccatcctcggccacctcggcatga
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