Nocardioides daphniae: E2C04_06100
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Entry
E2C04_06100 CDS
T05939
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2C04_06100 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndp03400
]
E2C04_06100 (mutM)
Enzymes [BR:
ndp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E2C04_06100 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E2C04_06100 (mutM)
DNA repair and recombination proteins [BR:
ndp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E2C04_06100 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
DUF7573
Zn_ribbon_6
NFACT_N
MCR
Motif
Other DBs
NCBI-ProteinID:
QCC76898
UniProt:
A0A4P7UC86
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All DBs
Position
1236638..1237324
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AA seq
228 aa
AA seq
DB search
MRRRGKYFWLALDDTDAILGHLGMSGQMLVKTPGAPLERHLRVRFPLDSGADLRFVDQRM
FGGLSYAPGGAVLPSEIAHIGRDPLDAEFDAEAVARRMRQRSSAVKRQLLDQTLVSGVGN
IYADEALWRARLHGERPGDRLTRAQALDVIEQARAVMLQALDQGGTSFDALYVNVNGESG
YFDRSLHAYGREDEPCDRCGAAIRRVAFMNRSSYFCPTCQPVPRRRRT
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgcgacgacgcggcaagtacttctggctcgccctcgacgacaccgacgccatcctcggc
cacctcggcatgagcgggcagatgctggtgaagacccccggcgccccgctcgagcgccac
ctgcgggtgcgcttcccgctcgactccggcgccgacctgcgtttcgtcgaccaacggatg
ttcggcggtctctcgtacgccccgggcggcgccgttctcccgtcggagatcgcccacatc
ggccgtgacccgctggacgccgagttcgacgccgaggcggtggcccggcggatgcggcag
cgctccagcgcggtcaagcgccagctgctcgaccagacgctggtctccggggtcggcaac
atctacgccgacgaggcgctctggcgcgcccggctgcacggcgagcgtcccggcgaccgg
ctcacccgggctcaggcgctcgacgtgatcgagcaggcccgcgcggtgatgctgcaggcg
ctcgaccagggcggcaccagcttcgacgccctctacgtcaacgtgaacggcgagtcgggc
tacttcgaccgcagcctgcacgcgtacggccgcgaggacgagccgtgcgaccggtgcggt
gcggcgatccgccgggtggccttcatgaaccgctcgtcctacttctgcccgacctgccag
ccggtgccgcgccggcgccggacctga
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