Nocardioides daphniae: E2C04_07695
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Entry
E2C04_07695 CDS
T05939
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp00220
Arginine biosynthesis
ndp00240
Pyrimidine metabolism
ndp00250
Alanine, aspartate and glutamate metabolism
ndp01100
Metabolic pathways
ndp01110
Biosynthesis of secondary metabolites
ndp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
E2C04_07695 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
E2C04_07695 (carB)
00220 Arginine biosynthesis
E2C04_07695 (carB)
Enzymes [BR:
ndp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
E2C04_07695 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MGS
CPSase_L_D3
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_2
ATP-grasp_3
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QCC77124
UniProt:
A0A4P7UBN0
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All DBs
Position
1568593..1571907
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AA seq
1104 aa
AA seq
DB search
MPKREDIKSVLVIGSGPIVIGQACEFDYSGTQACRILKEEGLRVILVNSNPATIMTDPEF
ADATYVEPITPEFVEKVIAKERPDAILPTLGGQTALNTATALHDNGVLEKYGVEMIGASF
EAIHRGENRELFNDIVRKVGGEVCRSFVCHSMDEVEKATEELGFPVVIRPSFTMGGLGSG
IAFNAEDLHRIAGAGLSASPTTEVLIEESILGWKEYELEVMRDKNDNVVIICSIENFDPV
GVHTGDSITVAPAMTLTDREYQHLRNLAIGVIREVGVDTGGCNIQYAVNPENGRVIVIEM
NPRVSRSSALASKATGYPIAKIAAKVAIGYTLDEIENDITSGPQGSTAASFEPTLDYVVV
KVPRFAFEKFPTADSTLTTHMKSVGEAMAIGRNFSEALNKALRSMESKGSQFTWTGEVGD
KKEILADVARPHDGRIQKLMLAIRAGATPEEIFDATKIDPWYVDQLFLVNEVAEAVAGAA
DLDAATLRLAKRHGFSDVQVAGLRGLTEAEVRAARHDLGIRPVYKTVDTCAAEFEARTPY
YYSSYDEETEVVPREREAVIILGSGPNRIGQGIEFDYSCVHAAQELSKAGYETIMVNCNP
ETVSTDYDTSDRLYFEPLTLEDVLEIVEAERAAGPIAGVVATLGGQTPLGLAQGLQDAGV
PIVGTSPEAIDLAEERGAFGRILAEAGLTSPKHGTAVSFEDARAIAHEIGYPVLVRPSYV
LGGRGMQIVYSDDTLETYLEAATELISAERPVLIDRFIDDAVEIDVDALYDGHELFLGGV
MEHIEEAGIHSGDSSCALPPITLGRSEIERIRTATEAIASGVGVRGLINIQFAIGADVLY
VIEANPRASRTVPFVSKATGTSLAKAASRVMLGATIAELRAEGLLPATGDGGLLPADAPI
AVKEAVLPFNRFRTHEGQFVDTVLGPEMKSTGEVMGFDADFGKAFAKAQAGSFGPLPVGG
KVFISIANRDKRTMIFPARVLADYGFELLATEGTAEVLRRNGIPSTVVRKHSSGTGPNGE
PTIVGMIQAGEVDLIVNTPNGSASGARYDGYDIRAAAVLTGTPCITTVQGAAAAVQGIAA
LRSGGIGVRSLQEWAALTSAATAR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaagcgtgaagacatcaagtccgtcctggtgatcggctccggcccgatcgtcatc
ggccaggcctgcgagttcgactactccgggacccaggcctgccgcatcctcaaggaggag
ggcctccgcgtcatcctcgtgaactccaacccggccacgatcatgaccgacccggagttc
gccgacgccacctacgtcgagccgatcacccccgagttcgtcgagaaggtcatcgcgaag
gagcgccccgacgcgatcctgccgacgctgggtggccagaccgcgctcaacaccgcgacc
gcgctccacgacaacggcgtcctggagaagtacggcgtcgagatgatcggcgcctccttc
gaggcgatccaccgtggcgagaaccgcgagctgttcaacgacatcgtccgcaaggtcggc
ggcgaggtctgccgctccttcgtgtgccactcgatggacgaggtcgagaaggcgaccgag
gagctcggcttcccggtcgtcatccgcccctccttcaccatgggcggcctcgggtcgggc
atcgcgttcaacgccgaggacctgcaccgcatcgccggcgccggcctctctgcctcgccc
accaccgaggtcctgatcgaggagtcgatcctcgggtggaaggagtacgagctggaggtg
atgcgcgacaagaacgacaacgtcgtcatcatctgctcgatcgagaacttcgacccggtc
ggcgtgcacaccggcgactcgatcaccgtcgccccggcgatgaccctcaccgaccgcgag
taccagcacctgcgcaacctggcgatcggcgtcatccgcgaggtcggcgtcgacaccggc
ggctgcaacatccagtacgcggtcaacccggagaacggccgcgtcatcgtcatcgagatg
aacccgcgcgtctcccggtcctcggcgctcgcgtcgaaggccaccggctacccgatcgcc
aagatcgccgccaaggtcgccatcggctacacgctggacgagatcgagaacgacatcacg
tcgggcccgcagggctccaccgccgcctcgttcgagccgaccctcgactacgtcgtggtc
aaggtgccccgcttcgcgttcgagaagttcccgaccgccgactccaccctcaccacccac
atgaagtcggtcggcgaggcgatggcgatcggtcgcaacttctccgaggcgctcaacaag
gcgctgcgttcgatggagtcgaaggggtcgcagttcacctggaccggtgaggtcggcgac
aagaaggagatcctcgccgacgtcgcccgtccgcacgacggccgcatccagaagctgatg
ctggccatccgcgccggcgccacgccggaggagatcttcgacgccaccaagatcgacccc
tggtacgtcgaccagctcttcctggtcaacgaggtcgccgaggccgtcgccggcgccgcc
gacctcgacgccgccacgctccgcctggccaagcgtcacggcttctcggacgtccaggtc
gccgggctgcgcggcctcaccgaggccgaggtgcgcgcggcgcgccacgacctggggatc
cgcccggtctacaagacggtcgacacctgtgcggccgagttcgaggcccgtacgccgtac
tactactcctcgtacgacgaggagaccgaggtcgtgccgcgcgagcgcgaggccgtgatc
atcctgggctccggcccgaaccggatcggccagggcatcgagttcgactactcctgcgtg
cacgccgcgcaggagctgtcgaaggccggctacgagacgatcatggtcaactgcaacccc
gagaccgtctccaccgactacgacacctccgaccggctctacttcgagccgctcacgctg
gaggacgtgctggagatcgtcgaggccgagcgcgctgccggcccgatcgccggcgtggtc
gccaccctcggtggccagaccccgctcggcctggcccagggtctgcaggacgccggtgtc
ccgatcgtcggcaccagccccgaggccatcgacctggccgaggagcgcggcgccttcggc
cgcatcctcgccgaggccggactgacctcgccgaagcacggcaccgcggtctccttcgag
gacgcgcgcgccatcgcccacgagatcggctacccggtgctcgtgcgcccgtcgtacgtc
ctgggtggccgcggcatgcagatcgtctactccgacgacacgctggagacctacctcgag
gccgcgaccgagctgatcagcgccgagcgcccggtcctcatcgaccggttcatcgacgac
gcggtcgagatcgacgtcgacgccctgtacgacggccacgagctcttcctgggcggcgtc
atggagcacatcgaggaggccggcatccactccggtgactcctcctgcgcgctcccgccg
atcaccctgggccgcagcgagatcgagcggatccgcaccgccaccgaggcgatcgcctcc
ggcgtgggcgtccgcggcctgatcaacatccagttcgccatcggtgccgacgtgctctac
gtcatcgaggccaacccgcgcgcctcgcgcacggtgcccttcgtctcgaaggccaccggt
acgtcgctggccaaggcggcctcccgggtgatgctcggcgccacgatcgccgagctgcgc
gccgagggcctgctgccggcgaccggtgacggtggcctgctgccggccgacgcgccgatc
gcggtcaaggaggcagtgctgccgttcaaccgcttccgcacccacgagggtcagttcgtc
gacaccgtgctcggcccggagatgaagtcgaccggcgaggtcatgggcttcgacgccgac
ttcggcaaggccttcgcgaaggcccaggccggctcgttcggcccgctgccggtcggcggc
aaggtcttcatctcgatcgccaaccgcgacaagcgcacgatgatcttcccggcgcgcgtc
ctggccgactacggcttcgagctgctcgccaccgagggcaccgccgaggtgctgcggcgc
aacggcatcccgtcgaccgtggtgcgcaagcactcgtccggcacggggcccaacggcgag
ccgaccatcgtggggatgatccaggccggggaggtcgacctgatcgtcaacaccccgaac
ggctcggcctcgggggcgcgctacgacggctacgacatccgtgccgcggccgtcctgacg
ggcacgccgtgcatcaccaccgtgcagggtgccgctgcggcggtccagggcatcgccgcc
ctgcgctccggcgggatcggcgtacgttcgctgcaggagtgggcagccctcaccagcgcc
gccacggctcgatga
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