Nocardioides daphniae: E2C04_08040
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Entry
E2C04_08040 CDS
T05939
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ndp
Nocardioides daphniae
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ndp03036
]
E2C04_08040 (xerD)
Chromosome and associated proteins [BR:
ndp03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
E2C04_08040 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
QCC77172
UniProt:
A0A4P7UAN7
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All DBs
Position
1637454..1638380
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AA seq
308 aa
AA seq
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MTADVTRAVRTYLDHLSVERGLADNTLTSYRRDLKRYLDFLATQQVDDLGSVTEQVVTAF
LSYLRDGDADHPPLGASSAARTVVAVRGFHKFALRDGLTTTDPAAAVRPPSQTKRLPKAL
PLSDVEAILEAAGAPGTVLALRDRALLEVLYGTGARISEAVGLDVDDLDLIDRTVLLRGK
GSKERLVPVGSYACEAVEVYLTRGRPELVSQGKGTPALFLNARGGRLSRQSAWSVLVKAA
DRAGVSQDVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDSLREVFA
TAHPRARG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgacggccgacgtcacgcgggcggtgcgcacctacctcgaccacctcagcgtcgagcgc
ggactggccgacaacacgttgacgtcgtaccgccgtgacctgaagcgctacctcgacttc
ctcgccacgcagcaggtcgacgacctcggcagcgtcaccgagcaggtcgtcaccgccttc
ctgtcctacctgcgcgacggcgacgcagaccacccgccgctgggggccagctcggctgcc
cgcacggtggtggcggtgcgtggcttccacaagttcgcgctgcgcgacggactcaccacc
accgacccggccgcggcggtgcgtccaccgagccagaccaagcggctgcccaaggcgctg
ccgctctccgacgtcgaggcgatcctggaggccgccggggccccgggcaccgtgctcgcg
ctgcgcgaccgcgcgctgctcgaggtgctctacggcaccggtgcccggatctccgaggcc
gtcggcctcgacgtcgacgacctcgacctcatcgaccggaccgtgctgctgcgcggcaag
ggaagcaaggagcgactggtgcccgtgggctcgtacgcctgtgaagccgtggaggtctac
ctcacccgaggcaggcccgagctggtcagccagggcaagggcaccccggcgctcttcctc
aacgcccgtggcgggcgtctgtcgcgccagagtgcctggtcggtcctggtgaaggccgcc
gatcgcgccggcgtcagccaggacgtctcgccgcacaccctgcgccactcgttcgccacc
cacctgctcgacggtggggcggacgtacgtgtcgtgcaggagctgctcggtcacgcctcg
gtcaccaccacgcaggtctacaccctcgtcaccgtcgacagcctgcgcgaggtcttcgcg
acggcccaccccagggcgcgtggctga
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integrated database retrieval system
