Nocardioides daphniae: E2C04_08350
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Entry
E2C04_08350 CDS
T05939
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp00750
Vitamin B6 metabolism
ndp01100
Metabolic pathways
ndp01240
Biosynthesis of cofactors
Module
ndp_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
E2C04_08350 (pdxS)
Enzymes [BR:
ndp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
E2C04_08350 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
TetR_C_27
DHO_dh
Glu_synthase
OMPdecase
Trp_syntA
FMN_dh
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
QCC77211
UniProt:
A0A4P7UCG0
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All DBs
Position
1696612..1697514
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AA seq
300 aa
AA seq
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MSTTQATSVGTSRVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQ
GGVSRMSDPDMIDGIIEAVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEVSRTPADYAH
HIDKWEFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNAVTHMRTIRGEIRRL
SGLSKDELYVAAKELQAPYELVAEVAERGELPVVLFTAGGIATPADAAMMMQLGADGVFV
GSGIFKSGNPAERAAAIVKATAFFDDPDVLAKVSRGLGEAMVGINVDELPVGHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacccaggccacgtcggtcggcacgtcgcgcgtgaagcgcggcatggccgag
atgctcaagggcggagtgatcatggacgtggtcacccctgagcaggcgaagatcgccgag
gatgcgggcgccgtggccgtcatggccctcgagcgggtcccggccgacatccgcgcccag
ggcggcgtctcgcggatgagcgaccccgacatgatcgacggcatcatcgaggccgtctcc
atcccggtgatggccaaggcgcggatcggccacttcgtcgaggcgcaggtcctccagagc
ctcggcgtcgactacatcgacgagtccgaggtgtcacgcacgcccgccgactacgcccac
cacatcgacaagtgggagttcaccgtcccgttcgtgtgcggcgcgaccaacctcggtgaa
gcactgcgccggatcaccgagggcgcggcgatgatccgctccaagggtgaggcgggcacc
ggcgacgtctccaacgccgtcacccacatgcggacgatccgcggcgagatccgtcggctg
tccggtctctcgaaggacgagctctacgtggccgccaaggagctccaggcgccctacgag
ctggtggccgaggtcgccgagcgcggcgagctgccggtggtgctcttcaccgcgggcggc
attgcgaccccggccgacgcggcgatgatgatgcagctcggggcggacggtgtcttcgtc
ggctccggcatcttcaagtccggcaacccggccgagcgcgccgcggcgatcgtcaaggcc
actgccttcttcgacgaccctgacgtgctggccaaggtctcgcgcggactgggcgaggcc
atggtggggatcaacgtggacgagctgcccgtcggtcaccggttggccgagcgcggctgg
tga
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