Nocardioides daphniae: E2C04_08390
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Entry
E2C04_08390 CDS
T05939
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E2C04_08390 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndp03400
]
E2C04_08390 (ruvB)
Enzymes [BR:
ndp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2C04_08390 (ruvB)
DNA repair and recombination proteins [BR:
ndp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E2C04_08390 (ruvB)
RecFOR pathway proteins
E2C04_08390 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
RNA_helicase
nSTAND3
MCM
AAA_3
Zeta_toxin
DUF815
NTPase_1
AAA_25
AAA_14
IstB_IS21
AAA_33
Sigma54_activ_2
AAA_18
NPHP3_N
AAA_19
TsaE
AAA_28
NACHT
NB-ARC
Parvo_NS1
ABC_tran
Rad17
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCC77216
UniProt:
A0A4P7UB76
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All DBs
Position
1703868..1704959
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AA seq
363 aa
AA seq
DB search
MAFSDEWSATDPLEAAEQEYLRTLVQAEADGDDRAVEAALRPRTLDEVVGQQRVRDQLGL
VLEAARQRGRAPDHVLLSGPPGLGKTTLAMIVAAEMQTALRLTSGPAITHAGDLAAILSG
VNEGDVLFVDEIHRMSRPAEEMLYMAMEDFRVDVVIGKGPGATAIPLDIPPFTLVGATTR
AGLLPGPLRDRFGFTAHLEYYEPSELDRIVRRSAGLLGVELTGEGAAEIASRSRGTPRIA
NRLLRRVRDYAQVRADGVLDRKVARAALELYEVDELGLDRLDLAVLDVLCRRFGGGPVGV
STLAVAVGEERETVEEVAEPFLVRNGMLARTPRGRVAMPAAWQHLGLTPPVESFGAQQAL
FEE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggccttctccgacgagtggtcggccacggacccgctggaggccgccgagcaggagtac
ctgcgtacgctcgtgcaggccgaggccgacggtgacgaccgggcggtcgaggcggcgctg
cggccccggacgctcgacgaggtggtcggccagcagcgcgtgcgtgaccagctcgggctc
gtgctggaggcggcccgccagcgcggtcgcgcccccgaccacgtgctcctctccggtccc
cccggactgggcaagacgaccctggccatgatcgtggcggcggagatgcagaccgcgctg
cgcctgaccagcggccctgccatcacgcacgccggcgacctggccgcgatcctcagtggc
gtcaacgagggcgacgtcctcttcgttgacgagatccaccggatgtcgcgtcccgccgag
gagatgctctacatggcgatggaggacttccgggtcgacgtggtcatcggcaagggaccc
ggcgccaccgcgatcccgctcgacatcccgcccttcaccctggtcggggcgaccacccgg
gcgggcctcctgccgggaccgctgcgggaccgcttcggcttcaccgcgcacctcgagtac
tacgagcccagcgagctggaccggatcgtgcgccgctcggccggcctgctcggggtggag
ctcaccggggagggggcggccgagatcgcgtcgcgctcgcgcggcacgccccgcatcgcc
aaccgcctgctgcgtcgcgtgcgcgactacgcgcaggtccgggccgacggggtcctcgac
cgcaaggtggcgcgcgctgccctggagctgtacgaggtcgacgagctcgggctggaccgg
ctcgacctcgcggtcctcgacgtcctgtgccgccgcttcggcgggggaccggtcggggtg
tcgacgctggccgtggccgtgggggaggagcgcgagaccgtcgaggaggttgccgagccc
ttcctggtccgcaacggcatgctggcccgcacgccccgcggtcgggtcgcgatgcccgct
gcctggcagcacctgggactcacgccgccggtcgagtcgttcggggcgcagcaggctctc
ttcgaggagtga
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integrated database retrieval system
