Nocardioides daphniae: E2C04_09065
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Entry
E2C04_09065 CDS
T05939
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
ndp
Nocardioides daphniae
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ndp03051
]
E2C04_09065 (pafA)
Enzymes [BR:
ndp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
E2C04_09065 (pafA)
Proteasome [BR:
ndp03051
]
Prokaryotic proteasome
Bacterial regulatory particles
E2C04_09065 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QCC77299
UniProt:
A0A4P7UEC7
LinkDB
All DBs
Position
1841131..1842492
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AA seq
453 aa
AA seq
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MDRRILGIENEYGVTCTFEGQRRLSPDEVARYLFRKVVAWGRSSNVFLANGARLYLDVGS
HPEYATPECDSVEDLVAHDKAGERILEDLMLDAQSRLEDEGIKGDIYLFKNNTDSGGNSY
GCHENYLISRQGEFSAVADVLIPFLVSRQIIVGAGKVVQTPRGATYAVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTTMLKVASCELVLRMIEDGVVM
RDLTLENPIRAIREMSYDMTGRRTVRLANGREASAVDIQAEYLGRALDYVDRRGVRTPTI
DRVLDLWERTLKAVDSDDLSMVEREIDWVIKYRLIERYRATHDLPLGHPRIAQLDLAYHD
IRRDRGLFQLLQKRGAVARVTDDATIDAAKNVPPQTTRAKLRGEFIRRAQEQNRDFTVDW
VHLKLNDQAQRTVLCKDPFRSEDERVERLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcaggatcttgggcatcgagaacgagtacggcgtcacgtgcacgttcgagggt
cagcgccggctcagtcctgacgaggtggcccgctacctcttccgcaaggtcgtcgcctgg
gggcgcagcagcaacgtcttcctggccaacggcgcccgcctctacctcgacgtcggcagc
cacccggagtacgccacgcccgagtgcgactccgtcgaggacctggtggcccacgacaag
gcgggggagcggatcctcgaggacctgatgctcgacgcccagtcgcggctggaggacgag
ggcatcaagggagacatctacctcttcaagaacaacaccgactccgggggcaactcctac
gggtgccacgagaactacctgatctcgcgccagggtgagttctccgcggtggccgacgtc
ctgatccccttcctggtgtcgcggcagatcatcgtcggtgccggcaaggtcgtgcagacg
ccgcgtggcgcgacgtacgcggtctcccagcgcgccgagcacatctgggagggcgtctcc
agcgcgacgacgcgcagccggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagcgctaccgccggctgcacgtgatcgtgggcgactcgaacatgagcgagaccaccacc
atgctcaaggtggccagctgcgagctggtgctgcggatgatcgaggacggggtcgtgatg
cgcgacctcaccctggagaacccgatccgcgccatccgcgagatgtcctacgacatgacg
gggcggcgtacggtgcgcctggccaacggccgcgaggcgagcgccgtcgacatccaggcc
gagtacctcggccgggccctcgactacgtcgaccgccgcggcgtgcgcaccccgacgatc
gaccgggtgctcgacctgtgggagcgcaccctcaaggccgtcgactccgacgacctcagc
atggtcgagcgtgagatcgactgggtgatcaagtaccggctgatcgagcgctaccgcgcc
acccacgacctgccgctgggccacccgcgaatcgcccagctcgacctggcgtaccacgac
atccgacgcgaccgcggcctcttccagctgctccagaagcggggcgccgtcgcccgggtg
accgacgacgcgacgatcgacgccgccaagaacgtcccgccccagaccacgcgcgccaag
ctgcggggcgagttcattcgccgggcccaggagcagaaccgcgacttcacggtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcgcaccgtgctgtgcaaggaccccttccgc
tcggaggacgagcgcgtcgagcggctcatcgccggcatgtga
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