Nocardioides daphniae: E2C04_11970
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Entry
E2C04_11970 CDS
T05939
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ndp
Nocardioides daphniae
Pathway
ndp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2C04_11970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndp03021
]
E2C04_11970
03019 Messenger RNA biogenesis [BR:
ndp03019
]
E2C04_11970
Transcription machinery [BR:
ndp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
E2C04_11970
Messenger RNA biogenesis [BR:
ndp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E2C04_11970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
TFIIA
Motif
Other DBs
NCBI-ProteinID:
QCC77718
UniProt:
A0A4P7UEE0
LinkDB
All DBs
Position
complement(2440927..2442909)
Genome browser
AA seq
660 aa
AA seq
DB search
MSETGETGAAAPKKKATSLNTMLLADLKAVAQGIGIKGAGSMKKAQLVEAIKATQDAHAQ
KSAAQPAAAPAAAAPSGDGVEAPAVRTTQRTRGARASRAGADVPLPTPGEAPAEVAAEAP
AAAQGGAPQPEGERRRERTRQGQQDKQQAQQQDKQQDKQGPQSKQDRSGGQDQNRDQNRD
QNRDQQGKGQQPKQDKSGQDKQGKGQQQNKQDQGQQSKQERSNQDRNQDRNADRNQDGNQ
GRDDDDLDEDGTGRRSRRRRGRERTAGRTGRTEPDTTILEDDVLVPAAGILDVLDNYAFV
RTSGLPAGPDDVYLSLSMVRKYGLRRGDALVGQVRHPREGERREKFNPMVRIDSVNGMDP
ENAKERAEFGEFTPIHPQDRLRLETDAANLLGRVVDVASPIGKGQRGLVVAPPRSGKTEV
VGAIASSISRNNPECHLMVVLIDERPEEVTDYQRSIRGEVIASTFDRPAGDHILIAELAV
ERAKRLVELGHDVVVLMDSLTSLGRAYQTVAPASGKVVHGGVDAAALHPAKQLFGAARNV
EDGGSLTILATAIVETGSSSDDAIFEEFAGTANMELVLRGELARRRIFPPVDVVASSTRR
EEHLLGEQEQETLLKLRTALMDVEPLTALESVLGRMGKTQNNVEFLTQVQQAVPESLVKR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagacaggcgaaaccggcgccgccgcgccgaagaagaaggccaccagcctcaac
acgatgctgctggccgacctgaaggcagtggcgcaggggatcggcatcaagggtgccggc
tccatgaagaaggcgcagctggtcgaggccatcaaggcgacccaggacgcgcacgcgcag
aagagcgccgcgcagccggcagccgcgcccgccgcggccgctcccagcggtgacggcgtc
gaggcgcccgcggtgcggaccacgcagcgtacgcggggtgcgcgcgcctcccgggcgggt
gccgacgtgccgctcccgaccccgggggaggcgccggccgaggtcgccgccgaggctccc
gccgcggctcagggtggtgctccccagcccgagggcgagcgccgtcgtgagcgcacccgc
cagggacagcaggacaagcagcaggcacagcagcaggacaagcagcaggacaagcagggc
ccgcagtccaagcaggacaggtccggtggccaggaccagaaccgggaccagaaccgggac
cagaaccgggaccagcagggcaagggacagcagcccaagcaggacaagtccggccaggac
aagcagggcaaggggcagcagcagaacaagcaggaccagggccagcagtccaagcaggag
cgcagcaaccaggaccgcaaccaggaccggaacgctgaccgcaaccaggacggcaaccag
gggcgcgacgacgacgacctcgacgaggacggcacggggcgccgcagccgtcgccgccgc
ggtcgcgagcgcaccgccggccgcacgggtcgtaccgagccggacaccacgatcctcgag
gacgacgtgctcgtgccggccgccggcatcctggacgtgctcgacaactacgcgttcgtc
cgcaccagcggcttacctgcggggccggacgacgtctacctctcgctctcgatggtgcgc
aagtacggtctccgtcgcggcgacgcgctggtcggccaggtgcgccacccgcgtgagggg
gagcgccgggagaagttcaacccgatggtccggatcgactcggtcaacgggatggacccg
gagaacgccaaggagcgcgccgagttcggcgagttcacgccgatccacccgcaggaccgc
ctgcgcctcgagaccgacgccgccaacctgctcggtcgggtcgtcgacgtcgcctcgccg
atcggcaagggccagcgcggcctcgtcgtggcgccgccgcgctccggcaagaccgaggtg
gtcggcgccatcgcgagctcgatcagccgcaacaaccccgagtgccacctcatggtcgtg
ctgatcgacgagcgtcccgaggaggtgaccgactaccagcgctcgatccggggcgaggtg
atcgcctccacgttcgaccgtccggcgggcgaccacatcctcatcgcggagctcgccgtc
gagcgggccaagcgcctggtcgagctcggccacgacgtggtcgtgctgatggactcgctg
acgagcctgggtcgcgcctaccagacggtggcgccggccagcggcaaggtcgtgcacggg
ggagtggacgctgctgcgctccaccccgccaagcagctcttcggtgcggcgcgcaacgtc
gaggacggtgggtcgctgaccatcctcgccaccgcgatcgtcgagacgggctcgtcctcc
gacgacgcgatcttcgaggagttcgccggcacggccaacatggagctggtgctgcggggt
gagctggctcgccgccggatcttcccgcccgtcgacgtggtggcctcctccacccgtcgt
gaggagcacctgctcggcgagcaggagcaggagacgctgctcaagctgcggaccgccctg
atggacgtggagcccctcaccgcgctggagtcggtgctgggccggatggggaagacgcag
aacaacgtcgagttcctcacccaggtgcagcaggccgtccccgagtcgctcgtgaagcgc
tga
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