Nocardioides daphniae: E2C04_11990
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Entry
E2C04_11990 CDS
T05939
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp00300
Lysine biosynthesis
ndp00470
D-Amino acid metabolism
ndp01100
Metabolic pathways
ndp01110
Biosynthesis of secondary metabolites
ndp01120
Microbial metabolism in diverse environments
ndp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E2C04_11990 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E2C04_11990 (lysA)
Enzymes [BR:
ndp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E2C04_11990 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QCC77722
UniProt:
A0A4P7UC02
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Position
complement(2446422..2447837)
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AA seq
471 aa
AA seq
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MSTTHEAGWAHASGALRGPTWLREPRDPNALVPQLWSSNARKVDGVLEVAGVKVTDLVAE
HGSPAYVLDEDDFRGRARAFRDAFADFDVYYAGKAFLSVAVARWIAEEGLNLDVCSAGEL
LVAQRAGLDMARVGYHGNNKTPSEIARAVELGVGRIIVDSFDEVARVTTLGERRAAAGES
DVRVMVRVTAGVEAHTHEYIATAHEDQKFGFSITSGDAFEAVRRLSAAPGVTLLGLHSHI
GSQIFDSAGFEVAARRVLALQARVASELDVTMPEMDLGGGFGIAYTTQDDPSTPAKLAKE
MTEIVAHECRALGISAPRLSIEPGRAIVGPSMCTVYEVGTVKDVALDGGASRLYVSVDGG
MSDNIRTALYDADYSCTVASRGSEAQPRLARVVGKHCEAGDIVVKDEFLPSDVTAGDLLA
VPATGAYCRSMASNYNHALRPPVVAVRNGASRVIVRRETEEDLLATDMGES
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccacccacgaggccggctgggcccacgcctccggcgcgctgcgcggacccacg
tggctgcgcgagccgcgtgaccccaacgcgctcgtgccgcagctgtggtcgagcaacgcc
cgcaaggtcgacggcgtcctcgaggtcgccggcgtcaaggtgaccgacctggtcgccgag
cacggctccccggcgtacgtcctcgacgaggacgacttccgcggtcgtgcccgcgccttc
cgcgacgcgttcgccgacttcgacgtctactacgccggcaaggcgttcctcagcgtcgcg
gtggcgaggtggatcgccgaggaggggctgaacctcgacgtctgcagtgccggcgagctc
ctggtcgcccagcgcgccggcctcgacatggcccgcgtcggctaccacggcaacaacaag
acgccctccgagatcgcgcgcgccgtcgagctcggcgtgggccgcatcatcgtcgactcc
ttcgacgaggtcgcccgggtcaccacgctcggcgagcgtcgcgcggcggcgggggagtcc
gacgtacgcgtgatggtgcgggtcaccgccggcgtcgaggcgcacacccacgaatacatc
gcgaccgcccacgaggaccagaagttcggcttctcgatcacctcgggcgacgccttcgag
gccgtacgccggctctccgccgcgcctggcgtgacgctgctgggcctgcactcgcacatc
ggcagccagatcttcgactccgccggtttcgaggtcgcggcccgtcgcgtcctggcgctg
caggcccgcgtcgcctccgagctcgacgtgacgatgcccgagatggacctgggcggcggc
ttcggcatcgcctacacgacccaggacgacccctcgaccccggcgaagctggccaaggag
atgaccgagatcgtggcgcacgagtgccgcgcgctgggcatctcggccccgcgactctcc
atcgagcccgggcgcgcgatcgtcggcccgtcgatgtgcaccgtctacgaggtcggcacc
gtcaaggacgtcgccctcgacggtggcgccagccggctctacgtcagcgtcgacggcggg
atgagcgacaacatccgcaccgccctctacgacgccgactactcctgcaccgtcgcgagc
cgcggctccgaggcccagccccggctggcccgcgtcgtcggcaagcactgcgaggccggc
gacatcgtcgtcaaggacgagttcctgccctccgacgtcaccgccggcgacctgctcgcc
gtgcccgcgaccggcgcgtactgccgctcgatggcgtcgaactacaaccacgcactgcgg
cccccggtggtcgccgtgcgcaacggggcgtcgcgagtcatcgtgcgccgcgagaccgag
gaagatctgttggcaaccgacatgggtgaatcatga
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